Pseudochaenichthys georgianus (South Georgia icefish): 117462360
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Entry
117462360 CDS
T09629
Name
(RefSeq) transcription termination factor 1-like
KO
K15225
transcription termination factor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117462360
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
117462360
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
XRN_M
Motif
Other DBs
NCBI-GeneID:
117462360
NCBI-ProteinID:
XP_033960450
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All DBs
Position
17:2653303..2685333
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AA seq
450 aa
AA seq
DB search
MQTSHTKKRRREEVSALVAAHHQEEKKRTKKDLLVVKEEKKKKKQMKKTSSTATAAQKQQ
LDWELVEEMQKFVPDIKNKCDAVIRKMLKYDLSRFKAFHQQGVCLRSGRCSHQENEQIRK
NMADFLSLTSVSSANLLLFPRRYKDQEVEIRKLRARHHFLERIAEGIPRSFHQVYTRARK
MFDDRNYNGRFSKEEVRSLMKLQTLHGNDWSMIAEKMDRSTYSLQKRFAHIAAGRGVWSV
EEEFRLKRALKAHLEALAGGPAGSEDSAASEGPSLTRDQLCNNLPWVETSQQVETRSWTQ
CRLKWFSLLKCKLASGVSTFNRGPEGLEAKIVLINTLYNMCVEDVADVDWDEVAHTVGNV
TPVCVQKSFHRLKVSRVPHWSGLFYGEIIDFLHLRVTPLLQEQLRKSKRQQDAQQEAKQE
RCYLLSDIFSSQDDFLELDNSQRTTDQSQL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagccacaccaagaagaggaggagggaggaggtcagtgctcttgttgctgca
caccaccaggaggagaagaagaggacaaagaaagatcttctggtagtaaaggaggagaag
aagaagaagaaacagatgaagaagacaagcagcacagcaacagcagcacaaaaacagcag
ctggactgggaactggtggaggagatgcagaagtttgttccagacatcaagaataaatgt
gacgctgtgatcagaaaaatgctgaaatacgacctgtcccgcttcaaagccttccatcag
caaggtgtgtgtctccgctccggccgctgctctcatcaggaaaacgagcaaataagaaag
aacatggcagacttcctgtctctgacaagtgtcagctcggccaatctgctgctgttccca
cgcagatacaaggaccaggaagtggagatcagaaaactgagagcacgacatcacttccta
gagaggatcgctgaggggattcctcgctcttttcatcaggtctacaccagagccaggaag
atgtttgatgaccggaactacaatgggaggttctcgaaggaggaggtgcgctctttgatg
aagcttcagactctgcacgggaacgactggtcaatgattgccgagaagatggaccgcagc
acgtactccttacagaaacgctttgctcacatcgctgcaggacggggtgtgtggagcgta
gaggaggagttcaggttgaagcgggcactgaaggctcacctggaggctctggctgggggt
cctgctggttctgaagattctgctgcttctgaaggtcctagtttaaccagagaccagctg
tgtaacaacctgccctgggtggagaccagccagcaggtggagacccggtcctggacccag
tgccgcctcaagtggttctctctgctgaagtgtaagctggcctcaggtgtgagcacattc
aacagaggacctgaaggactggaggctaaaatcgtcctcattaacacgctgtacaacatg
tgtgtggaggacgtggccgatgtcgactgggatgaggtcgctcatactgtcgggaacgtg
actcctgtgtgtgttcagaaaagtttccacagactgaaggtttccagagttcctcactgg
agcggcctgttctacggagagatcatagacttcctgcacctgagggtgactcctctcctg
caggagcagctgaggaagagcaagcggcaacaggatgctcaacaggaggcgaagcaggag
agatgctacctgctgtccgacatcttctcctctcaggatgacttcctggagctggacaac
agtcagcggaccaccgaccaatcacagctctaa
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