Pseudochaenichthys georgianus (South Georgia icefish): 117462366
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Entry
117462366 CDS
T09629
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117462366 (ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
117462366
NCBI-ProteinID:
XP_033960461
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Position
17:35291375..35306096
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AA seq
701 aa
AA seq
DB search
MDLLSNKWIVNLLVSWLFIGVGCNSVEKKIYVHLNYTVPCVRLLNATHQIGCQSSLSGNV
GVLHVLESEENVDWVLGTGANPPYLVILESALFTRSIMMKLKNGSGRVAGVAVIMPNTNP
LEGFSPHTSCPNENTGVYSETYDPSLAHCNVTVWNPFGNGLSYEEFDFPIFSMKDDDDTR
VIRQCYMDHNRGVNGSVPQYPLCAMQLYSHMSAVTDTATCMRRNDLNLSLSPEMICDPLG
DYNVWASTKPLNTTAKGHKTGESVVVAAARLDSRSFFFDVAPGAESGVSGFISLLAAASA
LKTVIQEAPPSRTIFYTFFQGETFDYIGSSRMVYDMENKQFAVDLDNVHSVLEIGQVGLR
ADSKLWLHSDPVSRKNDSVNDQVKTLITNLRSAAVNLSVSVDEPNVSQPLPPSSFQRFLR
ARPIPGLVLEDHESSFTNRFYESMYDTADHLNMSYPANLTQEEQLEFVTEIAKALTEVAT
LVARALYIQAGGAEVQLRNINADPEIVTRMLYGFLVRTNNTWFQQLVPSDLMSHLADRPT
NFYVGVAQQSSEPTLLVQYLLANMTGSHFNISQANCKNQREDEKDEESKHMYSYTWVQGA
APPNGTERQGFCVRSTVRLSKALSPAFDLKEYTSKDYSTWTESRWKVIKGRIFLVASPDL
EMMTLGVGVAVLIASLLLTYIMSSKADILFSSGREPANATY
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggatttgctctcgaacaaatggatagttaatttgctagtttcttggttattcatcggt
gtcggctgtaattcagtggaaaagaagatttatgtgcatctcaattacactgttccctgt
gtgcgacttctcaatgcaacacatcaaataggatgccagtcctcgctgtcaggtaacgtg
ggcgtccttcatgtgctcgagtcagaggagaacgtggactgggttctggggactggggcc
aatcctccttatctggtcatcctggagtctgcactctttaccagatccatcatgatgaag
ctgaagaacggctccggcagggtggcaggcgtcgctgttattatgccgaacacaaacccg
ctggagggcttctccccacacacctcctgccccaacgagaacacaggtgtgtattcagag
acctacgatccatccttggctcattgtaacgtcaccgtgtggaacccttttggaaacggc
ttgtcctatgaggagttcgatttccccatcttctccatgaaagacgacgatgacactcgg
gtcattcggcagtgctacatggatcataaccgcggtgtgaatggcagcgttcctcagtac
ccgctgtgtgccatgcagctctactctcacatgtccgccgtcaccgacacggccacctgc
atgaggaggaacgacctcaacttaagcctcagcccagagatgatttgtgatcctttgggt
gattataatgtttgggcctccaccaaacctctcaacacgacagccaagggccacaagacc
ggggagagcgtggtcgtagcggcagccaggttggacagccggtcttttttcttcgacgta
gctccgggtgcagagagtggagtctccgggttcatcagtctgctggcggccgcttctgct
ctaaaaaccgtcattcaggaagccccgcccagccgcaccatcttctacaccttcttccaa
ggggaaacgttcgactacatcggcagctccaggatggtttatgatatggagaacaagcag
tttgccgtggacctagacaatgtgcactcggtactggagattggacaggtgggacttcgc
gctgactccaagctgtggctccactcggatcctgtgtctcggaagaacgacagcgtcaat
gaccaggtgaagacgctcatcaccaacctgcgttctgctgccgtaaatctaagcgtctcc
gtggacgagccgaacgtctcccagccgctcccgccctcgtccttccagcgtttcctgcga
gctcgaccaatccccggtctcgttctcgaggatcacgagtcttccttcaccaacaggttc
tacgagagtatgtacgacaccgcagaccacctgaacatgtcgtacccagccaacctgacg
caagaggagcagctggagtttgtcaccgagatcgctaaggctctgacggaggtggccacc
ctggttgctcgggcgctgtacattcaggcgggaggagctgaagtccagctgagaaacatt
aacgctgaccctgagatagtgacccggatgctgtacggtttccttgttagaacaaacaac
acctggttccagcaactagtcccctccgacctcatgagccacctggcggacagacccaca
aacttctacgtgggcgtggcgcagcagtccagcgagccgaccctcctggttcagtatctg
ctggccaacatgacgggcagccacttcaacatctcacaggcgaactgcaagaaccagaga
gaggacgagaaggacgaggagagcaagcatatgtattcctacacgtgggtccagggcgca
gcgccccctaacggcactgagaggcaggggttctgcgtccgctccaccgtgcgtctctcc
aaagctctgtccccggccttcgacctgaaggagtacacctccaaagattactccacgtgg
acagagtcccgctggaaggtcatcaaaggacgcattttcctggtggcgagtcccgacctg
gagatgatgacgctgggtgtgggcgtcgccgtgctgatcgcctccctcctgctgacgtac
atcatgagctcgaaggccgacatcctcttcagctcgggacgggaacccgccaacgccacc
tactga
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