Pseudochaenichthys georgianus (South Georgia icefish): 117462434
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Entry
117462434 CDS
T09629
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117462434 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117462434 (prpf38b)
Spliceosome [BR:
pgeo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117462434 (prpf38b)
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Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
117462434
NCBI-ProteinID:
XP_033960559
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Position
17:21721501..21726743
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AA seq
453 aa
AA seq
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MANVGNQLPTQAVSKPASGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVNHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAYCLLYKLFTLKLTR
KQLMGLITHSDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKSIDVKMKARPRKVPVKETPEEEPEVEEPGKQGEQR
ASRTPKQTPSPKKSPKRSRSRSHHREKERHGPSFDRELERERDRQKKERGGGERGDREKR
RSRSADRNQDRRERRKSGSRDRKNERRDKERDGGDDKNKKKEREHHKDRGVEGERSKDKK
NRGETDERRHKEDRERHREERKAKKQSRSRERKHKSGGEEKSRKRDSRERDRERDGEQRS
HKRSGSKDRSHHQREPNNDHSKHIGRRRSQSTE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcggaaaccagctaccaacacaggccgttagcaagcctgcatcaggaaaa
catggaaatgtattgcccctgtggggcaacgaaaagactatgaacctcaacccaatgatt
ctcacaaatgtgctgtcttcgccgtatttcaaagttcagctttacgaacttaagacgtac
catgaagttgtggacgaaatctacttcaaggtgaatcacgctgagccttgggaaaaggga
agcagaaagactgcaggccagactggaatgtgcggaggggtgcgtggagtcgggactggt
ggtattgtgtctactgcttactgtcttctatacaaactgtttactctcaagctgactcgc
aaacagctgatgggtctgatcactcactcagactctccttacatcagagcacttggcttc
atgtacataagatacactcagcctccagcagatttggtagattggtacgacggcttcctg
gatgatgaggaggagcttgacgtgaaggcagggggcggctgtgtgatgaccgttggagag
atgctgcgctccttcttgaccaaactagagtggttctccactctgttcccccgcatcccg
gtgcccgtgcagaaatctattgacgtgaagatgaaggccaggcctcggaaagttcctgtg
aaagagacgccggaggaggaacccgaggtggaggagccagggaagcaaggagaacaacgc
gcctccaggacaccaaaacagacaccaagtccaaaaaagtcccccaaacggtcaaggagc
aggagccaccaccgcgagaaagaacgacacggccccagctttgaccgagagctggagagg
gagcgggaccgccagaagaaagagagggggggcggagagcgaggggacagggagaaacgg
cggtcccgcagcgcagacagaaaccaagaccgaagggagcgtagaaagagtggcagcagg
gacagaaagaacgaacgccgggacaaagaaagagacggcggggacgacaagaacaagaag
aaagagagggaacaccataaagacagaggcgtagagggggagaggtccaaagataaaaag
aacaggggggagactgatgagaggaggcataaagaggacagggaaaggcacagagaagag
aggaaggccaaaaagcagagccgcagtcgagagaggaagcacaagagcgggggggaagag
aagagcaggaagagagacagtcgagagagagacagggagagggacggagaacaacgctct
cacaaacgtagtggtagcaaagacaggagccatcatcagcgagagcccaataatgaccat
agtaaacatattggacgcagaaggagtcagagcactgagtaa
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