Pseudochaenichthys georgianus (South Georgia icefish): 117462525
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Entry
117462525 CDS
T09629
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117462525 (irf4a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117462525 (irf4a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
DUF6564
Motif
Other DBs
NCBI-GeneID:
117462525
NCBI-ProteinID:
XP_033960676
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All DBs
Position
17:26830940..26839781
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AA seq
466 aa
AA seq
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MINEMNLDEDSGLTVSCGNGKLRQWLIDQIDSRLYGGLVWENEEKSIFRIPWKHAGKQDY
NRDEDAALFKAWALFKGKYKEGVDKPDPPTWKTRLRCALNKSNDFDELVQRSQLDITDPY
KVYRIIPEAAKRGMKMSMEETPSHANSHGYVPPYTSPQNQVSGYMVSQERRDWRDYSPPE
QQPLPPPHHHGPHAELQYGSSHYPSAFSRAWPGSHTENGFQLSFHTYLSESQLPVYSFDQ
SNAITDFTLHVSLYYRESMVKEVTTTSPEGCRITSSSSSSPSSSSSSSSSSSEDKLHSGA
ETILFPFPYPESQRQGADMLPIVLEKGVLLWMTADGLYADRLCQGRVYWEGPMAPYMDKP
NKLEKEQPCKLFDTQQFLIELQDFVHNGRHVPRYQVVICFGDEYPDQQRQRKMITAQVEP
VFAKKLVHYYQQNNGHYLRAFDHIQEQNTSLTVDYPFQRPLQHIQE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgagatgaacctggacgaggacagtggcttgacagtcagctgtggcaacggc
aaactgagacagtggctgatagatcagattgacagcagactctatggtggcctggtctgg
gaaaatgaagaaaaaagtatctttaggattccgtggaaacatgcaggaaaacaagactat
aacagagacgaggatgctgctctcttcaaggcatgggcattgtttaagggaaaatataag
gaaggagtcgacaagccagacccccccacatggaaaacaagactacgctgtgctcttaat
aaaagcaatgactttgatgagttagtgcaaagaagccaactggacatcacagacccctat
aaagtctacagaataattccagaggcagccaaaagaggtatgaagatgagtatggaggag
acaccatcacatgcaaattcccatggctatgttcctccttatacgtctccgcagaaccag
gtatctggttatatggtttctcaggagagaagggactggagggattactcacccccagaa
caacaacctcttcctcctccacatcatcacgggccacatgcagagctgcagtatggttcg
agccactacccgtcagcgttcagccgggcttggccggggtcacacacagaaaatggtttt
cagctctccttccacacctacctgtcagagtctcaactgcctgtgtactcattcgaccaa
agtaatgccataacagatttcaccctgcatgtgtccttatactacagagagtctatggtg
aaggaggttaccaccaccagcccagaaggatgtcggatcacctcttcttcctcctcctct
ccatcatcatcttcctcctcttcttcctcaagctcagaggacaagcttcacagcggggcg
gaaaccatcctctttccattcccgtaccccgagtctcagaggcagggggctgacatgctt
cctatcgtactggagaagggtgtgcttttgtggatgacggctgatgggttatatgctgat
cgcctctgccagggacgagtgtactgggagggacccatggctccatatatggataaaccc
aacaagctggagaaggagcagccatgcaaactgtttgacacccagcaatttctcattgag
ctccaagattttgtccataatggccgacatgtaccaagatatcaggtggtgatatgtttt
ggagacgagtaccccgaccaacagcgccagaggaagatgatcacagcacaggtggagcca
gtgtttgccaaaaaactggtgcactattaccagcagaacaatggccactacctgcgggct
tttgatcacatccaggaacagaatacatctctaaccgtcgactatcctttccagagaccc
ctacagcatattcaggagtaa
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