Pseudochaenichthys georgianus (South Georgia icefish): 117462537
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Entry
117462537 CDS
T09629
Name
(RefSeq) leucine-rich repeat-containing protein 52-like
KO
K28883
potassium large conductance calcium-activated channel auxiliary gamma subunit LRRC52
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117462537
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117462537
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
LRR_5
LRRNT
LRR_Zer-1
LRR_9
Motif
Other DBs
NCBI-GeneID:
117462537
NCBI-ProteinID:
XP_033960697
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All DBs
Position
17:11038948..11058478
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AA seq
318 aa
AA seq
DB search
MRLAPQPSAQPLRLLVLLLLTVGGITSPVLTPGCPDRCVCDDQLVVQCAGQYLTTFPVNL
PLSTRQLIISNNRIVELPPLALNYLSDLVYLDCSNNSLTEISESTFGNLRKLAYLDLSFN
TLVRIEDRTFGPLASLVMLRMTDNPGLSEIHQDAFVDNAALQVLDVSRNNLTVVNITSLI
ALPALRSVGLSGNPWSCECENEDLCLWVHLEDFKFQDEGQTVCGSPADMQGRRLGEVGIQ
LRTLCHQTLGSWDYLFFFVIGFVIFAAGTVSAWVMGVIMVLYERYVKKKEEQLDPEDEEE
LGDRRDHGNGNLKMSHTV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgccccgcagccaagcgcgcaacctttgcggctcttagttctgctcctcctc
accgtgggggggatcacatccccggtgctcaccccgggctgcccggaccggtgcgtgtgc
gatgaccagctggtggttcaatgcgcggggcagtacctgaccaccttcccggtcaacttg
cctctgtccacgcggcagctcatcatctccaacaaccgtatcgtggagcttccgccgctc
gcgctcaactacctctcggatctggtgtacctggactgcagcaacaactccctcacggag
atctccgagtccacgtttgggaatctacggaagctggcctacctggatctctccttcaac
accttggtgcggatcgaggacaggacgttcgggcccttggcgagcctggtgatgctgagg
atgaccgacaacccggggctctcggagatccaccaggacgcctttgtggataacgctgcc
ctgcaggtgctggatgtgagtcgcaacaacctgacggtggtgaacatcacctccctgatc
gcgctgcccgccctgcgttccgtggggctcagcgggaacccgtggagctgcgagtgcgag
aacgaggacctgtgcctgtgggtgcacctggaagacttcaagttccaagatgagggccag
acggtgtgcggctcacctgctgacatgcagggccgtcgtcttggtgaggtgggcatccag
ctacggacgttatgtcaccagaccctgggctcctgggactaccttttcttttttgtcatc
ggctttgtcatctttgctgctggcaccgtgtcggcctgggtgatgggcgtcattatggtg
ctctatgagcgctacgtcaagaaaaaagaggagcagctggacccggaagatgaggaagaa
ctcggtgacaggagagaccatggcaacgggaatttgaaaatgtcacatactgtttaa
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