Pseudochaenichthys georgianus (South Georgia icefish): 117462621
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Entry
117462621 CDS
T09629
Symbol
kirrel1b
Name
(RefSeq) kin of IRRE-like protein 1b
KO
K25874
Kirrel/Neph family protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117462621 (kirrel1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117462621 (kirrel1b)
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
Other
117462621 (kirrel1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
C1-set
V-set
Ig_VEGFR-1-like_5th
Ig_5
Ig_4
Cementoin
Ig_6
Motif
Other DBs
NCBI-GeneID:
117462621
NCBI-ProteinID:
XP_033960784
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Position
17:complement(35684589..35719497)
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AA seq
816 aa
AA seq
DB search
MEFMAWPRYRVLRALDIGQYNLEISHSELSDDSLYECQATEAALRSRRAKLNVLIPPGDP
VVEGTPELLLMAGNPFNLTCVTRGAKPAAHIQWTKDGAAVEGAVQSTEVLPDRKRVTTRS
YLPIIPADTDSGRNFTCVASNPAVPMGKRATVTLNVHHPPMVTLSIEPRSVMEGERVTFT
CAATGNPPIIGIRWAKGGVLLDGARETVFVTTADHSFFTEPVSCQVFNVVGSTNVSILVD
VHFGPILIIEPRPVTVDVDADVTLNCKWSGNPPLTLTWTKKGSSMVLSNNNQLYLKSVSQ
ADAGQYVCKAIVPRIGVGETEVTLTVNGPPIISSDTVQYSVRGERGEIKCYIASTPPPDK
IVWAWKENVWEKEKGTLMERYTVEQSKPLDQGGAVLSTLTINNVMETDFHSPYNCTAWNS
FGPGTMIITLEETDIVPVGIIAGGTVGSCILLLMCLLALAFFLYRQRKGSRRGVTLGKPD
IKVETVNKETHGLEEEAADISTATRMVKAMYSPFKDDMDLKQDIRSESDTREEYELKDPT
NGYYNVRATTHEEARPQSRAIHYQGEFRSPNPNIGPAGPPSSGSPAGASGAVAPSGVPGS
RSGCYDPRPPSRISHPTYAQFNTFTRVAQSQQAPPNPTLQSPGDYPGDCGLMDNNAQLAY
DNYGYPSQYPTYRIGFAPPIEEGPAYEMYPTGQGPGPVMGPGPGMSPGPGMGQGPGMSPG
PGMGQGPGMGQGPGMSPGPGMGQGPAMGQGPAMGQGPAMGQGPAMGQGPGPGQGPGPGQQ
SPEAGLGQYGTSTRFSYSSPPSEYSQRHIQRMQTHV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggagtttatggcctggcccaggtaccgtgtgcttcgggctctggacatcggccagtac
aacctggagatctcccactcggagctgtcggatgactctctgtacgagtgtcaggccacg
gaggccgccctgcgctccaggagggccaaactcaatgtactcatcccgcctggagacccg
gtggtggaggggaccccggagctgctgctgatggccgggaacccgttcaacctgacctgt
gtgacccggggggccaagcctgcagcgcacatccagtggaccaaagatggagcggcagtg
gagggggccgtccagtccacggaagtgttacctgacaggaagagggtgacgaccaggagc
tacctgcccatcatcccggccgacactgacagcggtcgcaacttcacctgtgtagccagc
aaccctgcggttcccatgggaaaacgagctacggttaccctcaacgtccaccaccctcct
atggtgaccctttccatcgagcctcgctccgtcatggaaggagagcgagtaacgttcacc
tgcgcggccaccggaaaccctccgatcatcggaatcaggtgggcgaagggtggcgtgctg
ctggacggagcgagggagacagtgtttgtcaccacggccgatcactccttcttcaccgag
cccgtgtcctgccaggtcttcaacgtggtgggaagcaccaacgtcagcatcctggtggac
gtgcactttggccctatcctgatcattgagcctcggcctgtgaccgtagacgtggacgct
gacgtcactctgaactgcaagtggtctggaaacccccccctcaccctcacctggaccaag
aagggctccagcatggtgctcagcaacaacaaccagctgtatttgaagtcagtgagccag
gccgatgcaggccagtacgtctgcaaggccatcgttccccggattggagtgggagagact
gaggttacactcaccgtcaacggccctccaatcatctccagcgacacagttcagtactct
gtccgaggcgagcgaggagagatcaagtgttacatcgccagcacccccccacctgataag
attgtgtgggcctggaaggagaacgtgtgggagaaggagaagggcacgctgatggagcgc
tacaccgtggagcagagcaaacctctcgatcagggcggggccgtgctctccaccctcacc
atcaacaacgtgatggagacagacttccactcgccctacaactgcaccgcctggaactcc
ttcggacccgggaccatgatcatcaccctggaggagaccgatatcgtaccagtgggaatt
atcgccgggggtacagtgggctcctgcattctgctgcttatgtgtctcctggcgctcgcc
ttcttcctgtaccgccaacgcaaaggcagtcgccggggtgtcaccctcggtaaacccgac
atcaaggtagagacggtcaacaaagagacccacggcctggaggaggaggcggccgacatc
tccacggcaacccggatggtcaaggccatgtactccccgttcaaagacgacatggacctg
aagcaggacatccggagcgagagcgacacccgggaggagtacgagctcaaggatccaacc
aatggctactacaacgtccgagccaccacccacgaggaggcgcgcccccagtcccgggcc
atccactaccagggtgagttccgctctccgaacccaaacatcggaccggccggccccccc
tccagtggatccccagctggagccagcggagctgttgcccccagtggagtcccaggatcc
aggtcaggctgctacgacccccgccccccatccaggatctctcaccccacctacgcccag
ttcaacaccttcacccgggtggctcagagccagcaagcacctcccaatccaactctacag
tcgcctggagattaccccggagactgcggtctgatggacaacaacgcccagctggcctac
gacaactacgggtacccctcccagtaccctacttaccggataggcttcgctccacccata
gaggaagggccagcctatgagatgtatccgacagggcaagggccggggccagtgatggga
ccggggccagggatgagcccagggccagggatgggacaagggccagggatgagcccaggg
ccagggatgggacaagggccagggatgggacaagggccagggatgagcccagggccaggg
atgggacaagggccagcgatgggacaagggccagcgatgggacaagggccagcgatggga
caagggcctgcgatgggacaagggccaggaccaggacaagggccagggccgggacaacag
agtcctgaggcgggtctggggcagtacggaacctccactcgcttctcgtattcgtctccg
ccttctgaatattcccaaagacacatacagcggatgcagactcatgtttga
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