Pseudochaenichthys georgianus (South Georgia icefish): 117462712
Help
Entry
117462712 CDS
T09629
Symbol
astn1
Name
(RefSeq) astrotactin-1 isoform X1
KO
K24479
astrotactin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117462712 (astn1)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117462712 (astn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
Annexin_2
ASTN1_2_fn3
FXa_inhibition
TM_ErbB1
fn3
MACPF
Pur_ac_phosph_N
NDNF
Motif
Other DBs
NCBI-GeneID:
117462712
NCBI-ProteinID:
XP_033960886
LinkDB
All DBs
Position
17:complement(16619977..17113877)
Genome browser
AA seq
1321 aa
AA seq
DB search
MASINMGSRPLLLLGLAWLLMAVLTPNVRGLHNNDDQNQDSECKMKSVTVSALPFLREND
LSIMHSPSASEPKLLFSVRNDFPGDVVVVDDLENTELPFFVLEISGNSEDIPMVRWKQQW
LENGTLLFHIHHQDGSMNPPEPTQDPASDSAKEELRILHISVMGGMIALLLSILCLVLIL
YTRRRWCKRRRIPQPQKSASAEAANEIHYIPSVLMGGQARESLRNSRGQGPNSSGTLSIR
ETPILDGYKYEYDITDLRHHLQRECMNGGEEFASQVTRTLDSLQGCNDKNNMDLTPVSDN
TKLALMNKYKDNIIATSPIDSNHQQNTLLPHNTSTSQRKRLSSNTRGGSTFLNPDGDSGT
EADSEPQLAFYTDPNRSRRRSRGMRNGNANSAWGSGAAGSPRSPINKTTLTLISVISCVI
GLVYSSHMSCSIAVRVILHVPEHLIADGSRFILLQGSQMDASDWLNPAQILLYYQHNASG
PWANELCGRRLLDPCEHQCDPETGACLCLDGYMKDPVHKHLCIRSEWGPNQGPWPYTIFQ
RGFDLVMGEQPSDRIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAV
DVREELMISSSFDSLEVLLDSFGPVRDCTKDNGGCSRNFRCISDRKLDSTGCVCPPGLSP
MKDGTGCYDHHIGIDCSDGFNGGCEQLCLQQLAPLEDDPTLYNIQMFCGCIEDYKRGPDG
RSCLPLSEACTEGIDCAETVDIPANQTVFGDLFYGYNNHSKESTSGQILKATFRQKNFAR
GIEQQLPDGMVVASVPTEVQCHEELSDPIPDPEYLTGMVNFSEVSGYPLVQHWSLRSVLY
HVKLNQWVLSQAFSSAIHSLDGATQRSDFVSILREFGNHYVQEAVYGFQESCTIWYPNKQ
VQRQLWLEYQDISKGNSPSEESEEREKEPRTLTYPAYIASLLDTGAKRMAAGVRMDCNSQ
GQCPRSCHLCHMSPRTSQGRQQSEPVLLQITKAAPIYELVSNNETYQSLQEAMMSMLWCS
GKGDVIDDWCRCDSSAFGPDGLPTCAPLPHPLLKLSYTYEPSSSLVIMEWNHTEPPIGVR
IVDYLISQEKVTETMDHSKVETETLLSFVDDILSGARSPCVMLGDIPDLLSSSISMIIRC
LEPDTTYMFRLWAVDNTGRRSSPSEVTIKTPCPTVDDVKAQEISDKIYNLFNGYTSGKEQ
QTAYNTLMDLGAPTLHRVLYHYNQRYESFGEFTWRCEDELGPRKAGLILSQLGVLNPWCK
GLLQEPKIGLRRMSLKFLSCRYTDTKAFGLNWSHMGQDVHKACDEQTLTVMYNDYGEPKE
L
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatcaacatggggtcgagaccgctgctgctgctggggctcgcgtggctcctc
atggccgtcctaacgcctaatgtccgaggtctacacaacaacgatgaccagaaccaggac
tccgagtgcaagatgaagagcgtcaccgtgtctgcgctgccttttttgagggaaaacgac
ctgagcatcatgcacagtccgtcggcctccgagcccaagctgctgttctccgttcggaac
gattttcccggggatgtcgtggtggtggacgacctggaaaacaccgagctcccgtttttc
gtcttagagatctctgggaattcagaggacatccctatggtgcgatggaagcagcaatgg
ctggagaacggcactctgctcttccacatccaccaccaggacggcagcatgaaccccccc
gagcccacccaagacccggccagcgattctgcaaaggaggagctccgcatcctgcacatc
tctgtcatgggcgggatgatcgcccttctgctgtccatcctgtgcctcgtcctgatcctc
tacacccgccggcgctggtgcaagcgccgccgcatcccccagccccagaagagtgccagt
gctgaggcggctaatgagatccactacatcccctcggtgctgatggggggccaggcccgc
gagagcctgaggaactcccggggtcaggggcccaactccagcggtaccctcagcatccgg
gagactccgattttggatgggtacaagtatgagtatgacattaccgacctgcgtcaccat
ctgcagcgggagtgtatgaatggcggcgaggagtttgccagccaagtcacccgtaccctg
gactccctccaaggctgtaatgacaagaataatatggacctcacacctgtgagcgacaac
acaaagctggccctaatgaacaaatacaaggacaacatcatcgccacgagtcccatcgac
agcaatcaccagcagaacacgctgctcccacacaacacctccaccagccaacgcaagcgt
ctctccagcaatacccgtgggggttcaactttcttgaaccccgacggggactctggaacg
gaggcagacagcgagcctcagctggccttttacaccgacccaaaccgcagtcgacgccgg
agtcgaggtatgagaaacggtaacgccaacagcgcgtggggctcaggggcagcaggttcc
ccacggagtcccatcaataagaccaccctgactttgatcagtgtcatcagctgcgtgatc
ggcctggtgtactcctctcacatgtcctgcagcatcgcagtacgggtgattctacacgtt
ccagagcacctcatcgctgacggatcaaggtttattttgctgcaggggagccagatggac
gcatcagactggttgaacccggcccagatcttgttgtattaccaacataacgccagtggt
ccctgggccaacgagctgtgtggacgccgcctcctggacccctgtgagcaccaatgtgac
cctgagacaggagcatgcctctgccttgacggctacatgaaggacccggtccataagcac
ctctgcatccgtagtgagtgggggcccaatcagggtccctggccttacaccatcttccag
cgcgggtttgatcttgtgatgggagaacagccctctgatcgcattttcagattcacatat
accttaggagaagggatgtggctgccgttgagtaaaagctttgtcatcccccccgccgag
ctagccatcaacccttcagcaaagtgcaagacggacatgacagtcatggaggacgcggtg
gacgtaagagaggaactgatgatcagttcatccttcgactccttggaagtcctcctggac
tccttcgggccggtcagagactgcaccaaagacaacggaggctgtagccgcaacttccgc
tgcatctccgaccggaaactggactctacaggatgtgtgtgtcctccagggctgagtcct
atgaaggatgggaccgggtgctacgaccaccacatcggcatcgactgctccgatgggttt
aacggcgggtgtgagcagctgtgtctccagcagctggctcctctggaggatgacccgaca
ctctacaacatccagatgttctgtgggtgcatcgaggactacaaacgtggtccagatggg
aggtcatgtttgccgctgtcggaggcctgcaccgagggaatagactgcgccgagacagtg
gacatccccgctaaccagactgtgttcggagaccttttctacggatacaacaaccactcc
aaagagagcacgtctggacagatcctcaaggctacgttcaggcagaagaactttgcccga
ggcatcgagcaacagctcccagatggcatggtggtggcatcggtgccaacggaggtccag
tgccatgaggagctgtcggaccctattcccgacccagaatacctcacaggtatggtgaac
ttcagcgaggtgtctggctaccccctggttcagcactggagtcttcgctctgtgctgtac
cacgtcaaactcaatcagtgggtcctctctcaagctttcagctcggccatccattctctg
gacggggcaacgcagcggagcgactttgtctccatcctcagggagtttgggaaccattat
gttcaggaggcggtgtacggcttccaggagtcctgcaccatctggtaccccaacaaacag
gtccagagacagctgtggctcgagtaccaggacatcagcaaaggtaactctccttccgag
gagtcagaagagcgcgagaaagagccgaggacgctgacctaccccgcctacatcgccagc
ctgctggacacaggagcaaagcgcatggccgccggcgtccgcatggactgcaacagccag
ggccagtgcccacgctcctgccacctctgccacatgagccccaggacgtcccaggggagg
cagcagtctgagcccgtcctgctgcagatcaccaaggctgcacccatctatgaactggtg
tccaacaatgagacctaccagtctctccaggaggcgatgatgagcatgctgtggtgttcg
ggaaaaggtgatgtcatcgatgactggtgtcgctgtgattccagcgcatttggcccagac
ggactccccacctgcgccccactgccacatcctttgctgaagctgtcctacacctacgag
cccagcagctcattggtcatcatggaatggaaccacactgagccaccaatcggcgtgcgc
atcgttgattacctcattagccaggagaaggtgacggagacgatggatcactccaaagtc
gagacagaaacccttttgagcttcgtcgatgacatcttgtctggggccaggtctccttgt
gtgatgttaggggacatccccgacctcctgtcctcctccatcagcatgatcatccgctgc
ctagagccggacaccacctacatgttccggctgtgggcagtagacaacacaggccgccgc
tccagccccagtgaggtcaccatcaaaactccgtgtccaactgtggatgacgtcaaagca
caagaaatctcagataagatctacaacctgttcaatggttacaccagtgggaaggagcag
cagacggcctacaacactctaatggacctgggggcccccacactccaccgcgtgctctac
cactacaaccagcgctacgagagctttggggaattcacctggaggtgtgaggatgagctg
ggacccaggaaggccggcctcattctctcccagttaggagtgctcaacccgtggtgtaag
ggtcttcttcaggagccgaagatcggcctccgcaggatgtccctcaagttcctgtcctgc
cgctacactgacaccaaggccttcgggctgaactggtctcacatgggccaagacgtccac
aaggcctgcgacgagcagacacttaccgtcatgtacaacgactacggcgagcccaaggag
ctgtga
DBGET
integrated database retrieval system
