Pseudochaenichthys georgianus (South Georgia icefish): 117462714
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Entry
117462714 CDS
T09629
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117462714
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117462714
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_EndoS
Ig_2
LRR_14
LRRNT
LRR_6
LRR_9
LRR_LRWD1
V-set
Motif
Other DBs
NCBI-GeneID:
117462714
NCBI-ProteinID:
XP_033960896
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Position
17:complement(21139721..21179766)
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AA seq
620 aa
AA seq
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MIGSPGPGVRALVPRVWGWVLASSLVAIITLTLPGSSQACPPRCECSAQLRSVSCQRRRL
TNIPEGIPTETQLLDLSKNRLRWVQAGDLAPYPRLEEVDLSENLIATLEPNAFASLPSLK
VLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDLRSLKHLEVGDNDLVYI
SHKAFSGLLGLEDLIIERCNLTSISGQTLSYLRSLVTLRLRHLSIIALEDQNFRKLSNLR
GLDIDHWQYLEYISPFSFQGLDLRWLSITNTNITSVPSASFKNQVHLTHLNLSYNPITTL
EPWAFKDLLRLKDLIMVSTGLVTVELHAFGGLRQIRVLNFSSNDLQTLEEGSFHSVNSLE
TLRVDGNPLMCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLNTFTDSALFDHFTCQ
KPKIRNRKMQQVVAREGQPVSFLCRAEGEPAPAIIWISPQRRRITAKNSGRITVLPSGTL
EIRYAQLTDSGTYICIASNAGGNDTYFATLTVRGHPLDAASAFFLNRSLYGGEFFNDTNL
NSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSFRK
SEPVTGSSSGGTRKFNMKMI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcccctggccctggtgtgcgtgccttagtgccgagggtgtggggatgggtc
ctggcttcttctctggttgccataataaccttgacacttccaggaagtagccaggcctgt
ccgccacggtgcgagtgttcggctcagctgaggtcggtgtcgtgtcagcggcggcggctc
accaacatcccagaaggcatccccacagagacacaactcctggacctcagcaagaaccgg
ctccgctgggtgcaagcaggcgacctggcaccgtacccacggcttgaggaagtggacctc
agcgagaacctcatcgccacattagagcccaatgccttcgccagcctcccgagtcttaaa
gtgctgaagttgagggggaaccagctgaagctagttcccatgggggctttcgccaaactg
ggcaatctgaccagcttggacctgagcgagaacaagatggtgattttattggactacacc
ttccaagatctgaggagtctgaaacatttggaggtgggagacaacgacctggtttatatc
tcccacaaggcattctcagggctgctgggtctggaagatctcataatagagcgctgcaac
ctgacatccatatctggccagacgctgtcgtacctgcgcagcctggttactcttcgcctc
cgtcacctcagcatcattgccctggaggaccagaacttccgcaagctgtccaacctgcgg
ggcctggacatcgatcactggcagtacctggagtacatctccccttttagtttccagggc
ctggacctccgctggctctccatcaccaataccaacatcacctccgtcccctccgcttcc
ttcaagaaccaggtgcacctcacccacctcaacctgtcctacaatcccatcaccacactg
gagccctgggccttcaaggacctgctgaggctgaaggacctcatcatggtaagcacaggg
ttggtgacagtggagctccatgccttcggaggtcttcgacagatccgggtcctcaacttc
tcctccaacgacctgcagactttggaagagggctccttccactctgtgaacagtctggag
accctcagagtggacgggaaccccctgatgtgtgactgccgtctgttgtggatcctgcaa
agacgcaagaccctcaactttgacggcagagtgccggtgtgtgcggggccggtagaggtg
caaggggtcagcctgaacaccttcaccgattctgcactcttcgatcactttacatgccag
aaacctaagattcgcaaccgtaagatgcagcaggtcgttgctcgtgaaggccaacctgtg
agctttctgtgtcgagctgaaggagaacctgcacctgctattatctggatttccccacag
cgccggcggatcacagctaagaattcagggcgcattactgtcctcccgagtggcacctta
gagatccgctacgcccagctcactgacagcggtacatacatctgcatcgccagtaacgcc
ggaggcaatgacacctactttgccacactcacagtgcgcggccacccgctagatgctgcc
tcagccttctttctcaaccgctcactgtacggcggcgagttcttcaacgacacaaatctg
aacagcacgcgtgttttcctcaagttcacgttggacctgacgaccatcttggtctccacg
gccatgggctgcatcaccttcctgggggtggtgctcttctgtttcctgctgttgttcgtg
tggagccggggacgcggccaacgcaagaacaacttcacagtggagtactccttccggaaa
tctgaacctgtcactggtagctcctcaggagggaccaggaagttcaacatgaaaatgata
tga
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