Pseudochaenichthys georgianus (South Georgia icefish): 117462799
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Entry
117462799 CDS
T09629
Symbol
myripa
Name
(RefSeq) rab effector MyRIP
KO
K22237
Rab effector MyRIP
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117462799 (myripa)
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117462799 (myripa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
Motif
Other DBs
NCBI-GeneID:
117462799
NCBI-ProteinID:
XP_033961017
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All DBs
Position
17:complement(31202507..31242754)
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AA seq
1287 aa
AA seq
DB search
MGRKLDLSGLTDNEAEHVLQVVQRDMRLRKKEEERLSDLKQELDEEGSRCLLLSRQSCFN
RRCCIRCCSPFNFLLNPKRPCLDCHFNVCKACRRVYSKRDKTWLCSACQKSRLLKTQSLE
WFYTNVKTRFKRFGSAKVLKTLYRKHLAEHSALSEFTEGSGYEESICNEGSISGSDSAFY
RQIEEHSMAETLTVALRVAEEAIDEAISKAEFDTASQEKQNEALYLREHRGQLVEELSKT
IVQKIISRRNTLAEMRAEYDQVWPIENNTDLHDPHHPHPHHPDCDQASSSIEHQPGLWRS
HSAFSLMDDNPAGRIQNTQTLKKKEGGTLPTWKSVDRLDNAAVSSVLKSPGGNWIALQSA
QLSRPGLLTKRKSPFFSALEREAEVVSAYEGVSSDNETKSDSSWGGVLQEIHRKMADSNF
NLQDGIPFQLPGSRDELFSDSEGERKPRSLLALFKRKVPAEIRKPASSRRTSIIDVEGNG
EEEEREVAAEPDVLKVRRSRKKRRSTKKLSSSVRSQEDSEEDDHYQQTYEAATPDTLTSG
ASTPESDDLESDITGSGANQTEQELTAQPQFSQSSSGEEEGEEAEDGGARDASDDEHREE
ERQESEDGYEEDEGLWRMEIDPEEGRTEEGDDEEMESRLYRLVAHSRRTYFSSTDDDLDK
VGQSNEDKDEDVEEEKVGRLNSKLCELEKEVRANQFSSTEDELDRAGVMDEEEEKKEEEE
EEVKVCRLVNQANATVFSSTEDELDRVGRGEEAEAAMAEETLWKMQQEHLDVQNTRLRDL
ASLVSASQFSSSEDELERVGETEEEANEEGIEREEIVGDLRASFEDLDVDMLDVMGENEE
RKTESSDEDVCMQQSVPAEDICDEKVEILEEEAVKKAQGSERRQEMKFETVIQAEKTEEV
LNKAKVQQVDEKVAKRQDEEEVEEKQEEGQDAETDSDVDDAEFERIISSMLMMTLEDMQV
GTLEDEATENRSENIETEDTDESATVGGFEDSAVDARSTKVSEETGKVSQSRGDVKGNEQ
IGGDISRKKQSEDATGGSENEGEDTDVQEGHVNAAMEETPEVKQTCERIEVGDEEQGGRR
GAVLEEGTTMETQEDREEQSSTSSPHGLLSPEEIQNRYSAVSLRSITTEVLKVLNATEEL
LLLQGGGGDGPPCCTPLPPHTDPKKLDQQFSRLEENVYVAAGEVFSLEAELGDLEEVARG
VRSDTPGLELSFLEEQVASAAARVQQSELQISDISARIAALKSAGLNVDTQQARFTKTRN
VPFMPVTVDSSRQQRRRLPAPPVKEEN
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatctgtccgggctgacggacaacgaggcggagcacgtgctgcag
gtggtgcagagagacatgaggctgcgcaagaaggaggaggagcgcctcagtgatctgaag
caggagctggatgaggagggcagtcgctgccttctgctctcacggcagagctgcttcaac
cggcgctgctgcatccgctgctgctcgcccttcaacttcctcctcaaccccaagcgccct
tgcctcgactgccacttcaacgtctgcaaggcatgccgccgcgtctacagcaagcgagac
aaaacctggctctgctccgcctgccagaagagcaggttgttgaagacacagtcactggag
tggttctacactaatgtgaagacgcgcttcaagaggttcggcagcgccaaagtgctgaag
actctttacaggaagcacttggcggagcacagcgcactttcagagtttacagagggcagc
ggctacgaggagagtatctgcaatgaaggaagcatcagtgggagcgactcagccttctac
agacaaattgaagagcacagcatggcagagaccctcactgtggccttgcgggtggcagag
gaggcgatagacgaggccatttccaaggctgagttcgatactgccagccaggagaagcag
aatgaggctctgtacctgcgggagcacagaggacagctcgttgaggaactgtccaaaact
attgtgcagaaaattattagtaggagaaacactttggctgagatgagggcagaatacgac
caggtttggccaattgaaaacaacactgaccttcatgatcctcatcatcctcatcctcat
catcctgactgtgatcaagcctccagctccattgaacaccaaccaggcctctggaggtca
cactctgctttctccctgatggacgataatcctgccggtcgaatacaaaacactcaaacg
ctgaagaagaaggagggaggcacactgccgacctggaagagtgtcgaccggctggacaac
gctgcggtgtcgtcggtgctgaagagtccaggcgggaactggatcgccctgcagagcgcc
cagctgtcccgccccggcctgctgacgaagaggaagagcccgttcttcagcgccctggag
agggaggctgaagtcgtgtccgcctacgagggagtgagctccgataacgaaaccaaatcc
gacagctcgtggggcggcgtcctgcaggagatccacaggaagatggccgactctaacttc
aacctgcaggacgggatccccttccagctgccgggcagcagagacgagctgttctccgac
tcggagggcgagaggaagcccagatctctgctggcgctctttaagaggaaggtgcccgct
gagatcaggaaaccggcatcctccaggaggacgagcatcattgacgtggagggaaatgga
gaggaagaggagagagaggtggctgcagagccagacgttctgaaagtgaggagatcccgg
aagaaaaggaggagtacaaaaaagttgtcttcttctgtgcggtcacaggaagacagtgag
gaagacgaccattaccaacaaacatatgaggctgcgaccccggacactttgacctctgga
gcctcgacccctgagtctgatgaccttgagagtgacatcacaggaagtggagccaatcaa
acggagcaagagctcacggcacaaccgcaattttctcagtcctccagcggagaagaagag
ggagaagaggctgaggatggaggagcgagagatgctagcgatgatgaacacagggaggaa
gagagacaagaaagcgaggacggatatgaggaagatgagggtctttggaggatggagatc
gaccctgaagaaggaagaacagaggaaggggatgatgaggagatggaaagcagattgtac
agactcgtcgcacactccagacgaacatacttctcttcaacggatgacgatttagacaaa
gttggccagagtaatgaagacaaggatgaagacgtggaggaggagaaggtggggagacta
aactcaaaactctgtgagctagagaaagaagtccgggccaaccagttctcctccacagag
gacgagctggacagagctggagtcatggatgaagaagaagagaagaaggaggaagaggag
gaggaggtgaaagtgtgcagattagtcaaccaagccaacgcgaccgtgttctcttccacg
gaggacgagttagaccgagtaggaagaggcgaagaggcggaggcagcgatggctgaggag
acgttgtggaagatgcagcaggaacatctggacgtccagaacactcgactcagagatctg
gccagcctggtcagcgcctctcagttctcttcctctgaggatgagctggagagagttgga
gagacagaggaggaagcaaatgaagaaggaattgagagggaagagattgtgggagacctg
agagcgtcatttgaagatttagacgtggacatgcttgatgtaatgggtgaaaatgaggaa
agaaagacggagagcagtgatgaagacgtttgtatgcagcagagtgtaccagctgaggac
atatgtgacgaaaaagtagaaattttggaagaggaggcggttaaaaaagcacagggctca
gagaggagacaagagatgaagtttgaaacggtcatacaagctgagaaaacagaggaggtc
ttaaacaaggcaaaagtccaacaggtggatgaaaaggtggcaaagcgacaagacgaagag
gaagtagaagagaaacaagaagagggtcaggacgcagaaacagacagcgatgtggacgac
gcagagttcgagaggatcatcagcagcatgttgatgatgactttggaagacatgcaggtc
gggacattagaggacgaagctacggaaaataggagtgaaaatatagaaacggaggataca
gatgagagtgcaacagttgggggattcgaggacagcgctgtcgatgcacgaagcacaaag
gtatcagaggagacaggaaaggtgtcgcagagtcgaggcgacgtcaaaggaaacgagcaa
attgggggagacatttccaggaaaaagcagagtgaagatgctacaggcgggagtgagaat
gagggggaagacacagatgtacaagaaggacacgtaaatgcagccatggaagagacacct
gaggtcaaacagacatgtgagagaatagaagtgggtgatgaggaacaaggcggaagaaga
ggagcagtcctggaggaggggacgacaatggagacacaggaggatcgtgaagagcagagc
agcacgtcttctcctcacggtttactctcacctgaggagattcaaaataggtactcggcg
gtgtctctgcgcagcatcaccacggaggtcctgaaggttttgaatgccactgaggagctg
ctgctgctgcagggggggggaggagacggccccccatgctgcaccccgctgcccccccac
accgaccccaagaaactggaccagcagttctccagactggaggagaacgtgtacgtggca
gctggagaagtgttcagtctggaggcggagcttggagacctggaggaggtcgcccgcggc
gtccgcagcgacacgcccggcctggagctcagcttcctggaggagcaggtcgcctcggcc
gccgccagggtgcagcagtctgagctgcagatttctgacatctcggccagaattgctgct
ctgaagagtgcgggcctgaatgtggacacacagcaggcccgcttcaccaagacccggaac
gttccatttatgccggtcactgtggactcatcgaggcagcagaggaggagacttcctgct
ccacctgtcaaagaggaaaactaa
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