Pseudochaenichthys georgianus (South Georgia icefish): 117462825
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Entry
117462825 CDS
T09629
Symbol
itgb2
Name
(RefSeq) integrin beta-2 isoform X2
KO
K06464
integrin beta 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04145
Phagosome
pgeo04514
Cell adhesion molecule (CAM) interaction
pgeo04517
IgSF CAM signaling
pgeo04518
Integrin signaling
pgeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117462825 (itgb2)
04517 IgSF CAM signaling
117462825 (itgb2)
04518 Integrin signaling
117462825 (itgb2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117462825 (itgb2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117462825 (itgb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117462825 (itgb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117462825 (itgb2)
04515 Cell adhesion molecules [BR:
pgeo04515
]
117462825 (itgb2)
04090 CD molecules [BR:
pgeo04090
]
117462825 (itgb2)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117462825 (itgb2)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117462825 (itgb2)
Cell adhesion molecules [BR:
pgeo04515
]
Integrins
Integrin beta subunits
117462825 (itgb2)
CD molecules [BR:
pgeo04090
]
Proteins
117462825 (itgb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
vWA_SIBA-E
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117462825
NCBI-ProteinID:
XP_033961049
LinkDB
All DBs
Position
17:complement(38227856..38265766)
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AA seq
780 aa
AA seq
DB search
MENYLLFLLLMLMGENGLCQQEKGCSKSMVNSCGDCMRSAPECVWCKQLNFTKAGEQEAV
RCDTKAQLMKRGCKREEIISPENTLVIVKADPLSVSFNKQLKQPVQLSPQKISLRLRPGL
PKTFRVSFKRVQGYPVDLYYLMDLSYSMKDDLANVKELGKDLFAALKSITNSAQIGFGAF
VDKTVLPYTNTNKEKLLKPCDENYQKCQAAFGYRHVLSMTSEEEQFKTKVTEEFISGNLD
SPEGSLDAMMQAAVCGERIGWRNSSTRLIVLTTDAGFHMAGDGKLAGILEPNDEQCHIEN
SLYTKSNVMDYPSVGQLAMQLEKNNIQPIFAVTKNVEDVYKQLTKLIPKSEVGVLSSDSK
NVVELIKDAYKRLSSKVTVTHDNLPEHVSVVYTPNCKGAGPAGESEGICDNVSVGEEINF
DVTVTADTCIEDKSFTIRPLGIKDTLTVTLSSNCECECQDPQDSSHPHCNGTGRVSCGIC
SCSEGSIGQFCECSIGEKDELTLRASCQRNNGTECEGRGDCVCGRCQCHTTESGSSYYGD
FCECDDEHCEKFQNKLCGGNGKCNCGRCDCFSGFEGSACQCKVSEEGCRTLNNTVCYNRG
TCKCNRCECKDGYQHPRCHKCLGCLDPCQTKLNCIECLGFESGPFKKNCSVACKKSIYHE
MVDQFTVQSKKCHQKDTEGCWIRFDLDQLFGEDHYKANILKERDCPKPPSVIAIIGGSIA
SVALIGILMLMLIKLLLYMKDIKEFRKFENEKKKSKWAEADNPLFQTATTSVSNPTFTGE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggagaattatttgctgtttcttctgctcatgctgatgggtgaaaatggattgtgtcaa
caggagaaaggttgctcaaagtcgatggtcaactcatgtggtgactgtatgagatctgcg
ccagagtgtgtgtggtgcaaacagctgaattttacaaaagcaggtgagcaggaagcagtg
cgctgtgacaccaaagctcagttgatgaagagaggctgcaagagggaagagatcatctcc
ccggagaacactctagtcatcgtgaaggcagatcctctgtccgtgtcattcaacaaacag
ctgaaacagcctgttcagctgagtccacagaagattagtttgagactgcgacctgggctt
cctaagacattcagggtttctttcaaacgagttcagggttatccggttgatctctactac
ctgatggacctgtcttactccatgaaagacgacttggcaaatgtcaaagaactgggaaaa
gatctttttgcagctctgaagagtatcactaattctgctcaaatagggtttggtgcgttt
gttgataagacagttcttccttacacaaacaccaacaaggagaaactgctgaagccgtgt
gatgagaattaccaaaagtgccaggctgcctttggctacagacatgtgcttagtatgacg
tcagaagaagaacagttcaaaacaaaagtaactgaggagttcatttctgggaacttggac
tctccagaaggtagtctggacgccatgatgcaggcggccgtgtgtggggaaagaataggt
tggaggaacagcagcactcggctgattgtgctgaccactgatgccggattccacatggcc
ggagatggaaaattagctggcatactggaacccaatgatgaacagtgccacatagaaaac
agcttgtacaccaaaagcaatgtaatggactacccatctgttggacaactagccatgcag
ttggaaaaaaacaatattcagccgatatttgcagtgacaaaaaatgtggaggatgtgtac
aagcaactcactaaattgattccaaaatcagaggtgggagttctgtcctcagattcaaaa
aatgtggttgaattgatcaaggatgcctacaaaaggttgtcgtccaaagtgactgtgacc
catgacaatctgcctgagcatgtgagcgttgtctacacccccaactgcaagggtgcagga
ccagcaggggagagcgaagggatttgtgataatgtatcagtgggagaggagattaatttt
gatgtcacagtgacagcagacacgtgtattgaagacaagtctttcaccataagaccactg
ggaattaaagacacattgacagtgaccctatcttcaaactgtgagtgtgaatgtcaagac
ccacaggacagcagtcacccacactgcaacggcacgggaagagttagctgtggtatttgc
agctgcagcgaaggctccatcggtcagttctgcgagtgctcgattggggaaaaagacgag
ctcacgctgcgagcgtcctgtcagaggaacaacggcaccgagtgtgagggccgaggagat
tgtgtgtgtggcaggtgccagtgccacaccacagagagtggaagtagttactatggtgac
ttctgcgagtgtgacgatgagcactgtgagaagttccagaataaactatgtggaggaaac
ggtaaatgcaattgtggcagatgtgactgcttttcaggctttgaaggctcagcctgtcag
tgtaaggtgtctgaggagggctgtaggaccctcaacaacaccgtgtgctacaacagaggg
acctgcaagtgtaaccgctgtgagtgtaaggacggataccagcatccacgatgccacaaa
tgcctcggctgcctagacccctgccagaccaaactgaactgcattgaatgccttggcttt
gagtccggtccctttaaaaaaaactgcagtgtggcttgcaaaaaaagcatttatcacgag
atggttgatcagttcaccgtacaaagcaagaagtgccatcagaaggacacggagggatgc
tggatcaggttcgatctggaccagttgttcggagaagatcactacaaggctaacattctc
aaagagagagactgtccgaagccccccagtgtcatagctatcatcgggggctccattgca
tctgttgctctcattggcatcctgatgctgatgctcatcaagctactcctctacatgaag
gacataaaagaattcagaaaatttgaaaatgaaaagaagaaatccaagtgggcagaggct
gacaaccctctgttccagacggccaccacctcggtgagcaaccccaccttcaccggagag
tga
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