Pseudochaenichthys georgianus (South Georgia icefish): 117462857
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Entry
117462857 CDS
T09629
Symbol
il16
Name
(RefSeq) LOW QUALITY PROTEIN: pro-interleukin-16
KO
K22628
interleukin 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117462857 (il16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pgeo04052
]
117462857 (il16)
Cytokines and neuropeptides [BR:
pgeo04052
]
Cytokines
Interleukins
117462857 (il16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117462857
NCBI-ProteinID:
XP_033961097
LinkDB
All DBs
Position
3:complement(5186259..5244868)
Genome browser
AA seq
1518 aa
AA seq
DB search
MIDYERPSPLGFGPAGRSVMVPELPEHTHTHTLTAMPQRYSHQRRKASTAAARRMERRRS
DQGRGNCSPPSTPSSHHQRSKKLAMLSRSLILCHSKTNDDCLEEVSHGCRTWGPGGRTDG
TVGDQTQCGDAEDGHWRTALERRGGTEADHSVTLRGNKRSLRRSFSIKESSIWKMCVATG
PAEEVCGPQTADNSVQTEDKDPNVPGRNGETTQRHCSFLSPDKLAPFNGHFLNGSTWIAG
EGMRSVHIKAFSEDISTCEDTLHSHSLNTSPQHPALTPPSGPLCLPGCTEEELMANNNHL
KLPIPEVNEDRCWDTEKQKPPGQTVNSTGVHPYWIGDLDSIIMKSPELYSTHPHGNGGLY
GNRKSLSQQLEFPHTTTQPVRPSRSLSSAQLVHSCSNVQAFIICNVVLMKGHGKGLGFSI
VGGRDSMYGPMGIYVKTIFPGGAAAADGRLHEGDEILELNAESLHGLTHDEALYKFKQIK
KGLLTLVVRTSLRGGAGCGPEAQLXCRSRSLSSSSGLARVSADYSYLNSSCSDSPRAPGD
RVVMEIILHKEAGVGLGIGLCWVPSGDGCPGIFIHTLLFHGSVAHMDSRLRXGVWDEIME
INDTVVTSMALNDVYTVLSQCSPGPVHIIISRHPDPKVSGQQLNDAIAQAVENSKLRKEK
SQWSIDGLRRLEPCSHSRQRCERCLEKTFSQLTVRRAQKTMTRSCSDNTSSPHHNQSSLH
STSTTHTITPSARVHSLDTPQSMRETWSDNRLSVPVYPDEDYNVPYNTAAAHLSNQHALD
PALRSNKSTCRVRAAPHRHCWPQDVTSEEGYNGDSSGSSGGSPVREGGWSPPHTACQEGE
RLREHSAEGTAACTNNRRHTGNAPLLLCSQSKRGALRRQXSTDQHTQARIEDPWVRLADX
APPELMLHHHPAAADRTHPPTMSDQENTPEVTGTHSDVTSDPPSDTTPENTCETPPGEKT
APPVAPKPAWFRQSLRNIRNEQGQKKQDKPAELRSVGGFTRTYGGRSASSSANLSIKQKI
HSFETFSSPEVSEKGGNRRPSATSTSLPLEESRSRPASHGDSGRGQHEVQEEIQEITSPC
DSEPEDPPVFATPSAIPSSTLEACSQTAAGDDPPSIQPPRRSALCDSTDLHSGTHGGPPS
APLPARQEAELEEDLTSSNQNTVSPPATSMISQEGGESLKXERDGAENQGKPLSPTLSAA
PPAGSHHQRGLEEASLEKILAFSNQVSQAVMRSHSDLLPSVESDAEEREQDSSERGFSVS
LATLRECTIERGEGGHHDEAAGSSAHSVISAIPSQEIQRMIQEVKALDQDTLKQLVDIHV
VILHKEEGAGLGFSIAGGSDLESKALTVHKVFPSGLAAQEGTIQRGDEVLSINGHTLRGV
THTDATSALRQARSLQLAVVVVCKRAEEGDGCRTEDLHPAVVLHSAPLTVELQKGAAGVG
FTLEGGRGSLHGDRPLVLNRIFAGGAAEQSGLQRGDELLQVQGVSLQDMTRFEAWNMIKA
LPEGVITAVLRRGPGGGE
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactacgagcgtccctctccattaggctttggaccagctgggaggagtgtgatg
gttcccgagctccctgagcacacacacacacacactctgacagccatgcctcagagatac
tcccaccagaggaggaaagccagcacagcagctgctaggaggatggagagaagacgcagc
gatcaggggagaggcaactgcagcccccccagtacccccagcagccaccaccagcgctcc
aagaagctggccatgctctccaggtctctgatcctctgtcactctaagaccaatgatgat
tgtctggaagaagtgtcacatgggtgcaggacgtggggcccgggggggaggactgacgga
actgttggggaccaaacccagtgcggagacgcagaggatggacactggaggacagctctg
gagagaagaggaggcacggaggcagaccatagcgtcacactcaggggaaataaaaggagc
ctcaggaggtccttcagcatcaaggagagcagtatctggaagatgtgtgtagccacaggg
ccggctgaggaggtatgtgggccacagacggctgataacagtgtccagacagaagacaaa
gaccctaatgtgccagggaggaatggagagaccacacagagacactgcagcttcctgagc
ccagacaagctggctccctttaacggacactttctaaacggcagtacttggattgcaggg
gaggggatgaggagcgttcacataaaagccttcagtgaggacatctccacatgtgaagac
actctccattcacacagtctgaatacaagcccacagcaccctgccctcacccccccctct
ggccctctgtgcctgcctggatgcacggaggaggaactgatggccaacaacaaccacctc
aagttacccatcccagaggtgaacgaggacagatgctgggacacagagaagcagaagcca
ccaggacagactgtcaattcaaccggtgttcacccgtactggatcggagatctggacagc
atcatcatgaagagcccagagctttattccactcatccccatggcaacgggggtttatat
ggaaacaggaagtccctgtcccagcagctggagttccctcacaccactacacaaccggtg
cgcccctcccgctccctcagctctgctcagctggttcactcctgcagtaacgtgcaggcg
ttcatcatctgtaacgtggtgctgatgaagggccacggaaagggcctgggcttcagcatc
gtggggggccgggacagcatgtatggaccgatggggatctatgtgaagaccatcttccct
gggggggcagcagctgctgatggaagactgcatgagggggatgagatcctggagctgaac
gcagagtctctccatggcctgactcacgatgaagccctgtacaagttcaaacaaatcaag
aaggggctgctgaccctggtggtgaggacgagcctgcgggggggggcagggtgtggtccg
gaggcccagctcnnttgcaggtctcgctccctcagctccagctccggcctggcccgggtc
agcgctgactacagctacctgaacagcagctgcagcgactccccgagggccccgggcgac
cgcgtcgtcatggagatcatcctgcacaaagaggcaggtgttggtctgggcatcgggctg
tgctgggttccatctggtgacggctgtcctgggatcttcatccacaccctgctcttccat
ggatcagtcgcacacatggacagcagactgcggtgaggagtgtgggatgagatcatggag
atcaacgacactgtggttacaagcatggcactgaacgatgtgtacacggtgctgagccag
tgctctccaggtccagtccacatcatcatcagccgacaccccgaccccaaagtgtcaggg
cagcagctgaatgatgctatcgctcaggcagtggaaaacagcaaactgaggaaggagaag
agccagtggagtattgatggtctgcgcagactggagccctgctctcacagtcggcagagg
tgtgagcgctgtctggagaagactttcagtcagctgacagttcgacgggcgcagaagacc
atgacccgctcctgcagcgacaacaccagcagcccccaccacaatcaatcctcactacac
agcacctccacaacacacaccatcaccccatccgcccgcgtgcacagcctggacacaccc
cagtctatgagagagacgtggtctgacaacaggctgtcagtgcctgtgtatcctgatgaa
gactacaacgtcccctacaacactgctgctgcacacctgtccaatcagcacgccctggac
ccggccctcaggagcaacaagtccacctgccgggtgcgtgctgctcctcacaggcactgc
tggccgcaggatgtgaccagtgaggagggctataacggagactccagcggctccagtgga
gggtccccagtcagagaggggggctggagtcctcctcacacagcttgtcaggaaggagaa
cgattaagagaacactctgcagaggggactgcagcctgcaccaacaacagacgacacaca
ggtaatgctccgctgttgctctgctcccagtcgaagagaggagctctgaggagacagncc
tccactgaccaacacacccaggcacgcatcgaggacccctgggttcgcctcgcagacnnc
gccccccctgaattgatgctccaccaccaccccgccgctgccgacagaacacaccccccc
accatgagcgaccaggagaacacacctgaggttaccggcacacactcggacgtcacctca
gatcctccctcggatacgactcctgagaacacatgtgagactcctccaggagaaaagacg
gcccccccggtggcccccaagcctgcctggttccgccagagtctgaggaacatccggaat
gagcagggccagaagaagcaggacaaacccgcagagctgaggtcagtggggggcttcacc
aggacctacgggggcagatccgcctcatcttcagccaacctgtcaatcaaacagaagatc
cactcctttgagactttttccagtccggaggtttcagagaagggggggaacaggagaccc
tcggccacctccacctctctacctctggaggagagcaggagtcgccctgcctcacatggg
gacagtgggaggggccaacatgaagtccaagaagagatccaggaaatcacctctccgtgt
gacagcgagccagaggacccccctgtctttgctacaccttctgctatcccctcctccacg
ttggaagcatgcagtcaaacagccgctggagatgaccccccctctatccaacccccccgc
agatctgcactgtgtgacagcactgatctgcactcagggacacatggtggtcctccatca
gctccacttcctgccagacaggaagctgagctagaagaggatctcaccagctccaatcag
aacacagtctctccccctgccacatccatgatatctcaagaggggggagagagcctcaag
naagagagagatggagcagagaaccaagggaagcccctgagccccaccctgagtgctgcg
ccccccgcaggcagccaccatcagagaggcctggaggaggccagtttagagaagatcctc
gccttcagtaaccaggtttcccaggcggtgatgcgctctcacagcgacctgctgccctct
gtggagagcgatgctgaggagagagagcaggacagcagcgagagaggcttctctgtcagc
ttggccacactgagggagtgtaccattgagcgaggggagggggggcaccatgacgaggca
gcaggctcctctgctcactctgtcatctcagccatcccctcacaggaaatacagaggatg
atccaggaagtcaaagctctggaccaagacacgctgaagcaactggtggacatccatgtg
gtgattctgcataaagaggagggggccgggctgggcttcagcatcgcaggggggtccgac
ctggagagcaaggctctgacagtccacaaagtgttccccagtggcctggcggctcaggag
ggaaccatccagagaggagacgaggtgctgtccataaacggacacacactgcgcggtgtc
acacacactgatgccaccagcgctctgcggcaggcccgcagtctgcagctggctgtggtg
gtggtctgcaagagggcggaggagggggacggctgcaggacggaagacctccaccctgca
gtggtcctgcactccgccccgctgacggtggagctgcagaaaggagctgcaggagtgggc
ttcaccctggaggggggccggggctccctccatggagacagacctttagtcctcaacagg
atctttgcagggggggcagcggagcagagcgggctgcagcggggggacgagctgctgcag
gtgcagggggtcagtctgcaggacatgacccgcttcgaggcctggaacatgatcaaggct
ctccctgagggggtcatcactgctgtgctgaggagggggccgggcgggggggagtga
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integrated database retrieval system
