KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117462873
Entry
117462873         CDS       T09629                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04382  Cornified envelope formation
pgeo04510  Focal adhesion
pgeo04512  ECM-receptor interaction
pgeo04514  Cell adhesion molecule (CAM) interaction
pgeo04518  Integrin signaling
pgeo04810  Regulation of actin cytoskeleton
pgeo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117462873
   04514 Cell adhesion molecule (CAM) interaction
    117462873
   04518 Integrin signaling
    117462873
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117462873
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117462873
   04810 Regulation of actin cytoskeleton
    117462873
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    117462873
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgeo04147]
    117462873
   04515 Cell adhesion molecules [BR:pgeo04515]
    117462873
   04090 CD molecules [BR:pgeo04090]
    117462873
Exosome [BR:pgeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117462873
  Exosomal proteins of breast milk
   117462873
Cell adhesion molecules [BR:pgeo04515]
 Integrins
  Integrin alpha subunits
   117462873
CD molecules [BR:pgeo04090]
 Proteins
  117462873
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3
Other DBs
NCBI-GeneID: 117462873
NCBI-ProteinID: XP_033961118
LinkDB
Position
17:20147707..20169799
AA seq 1081 aa
MEVRITCGLWFFAFILGCGRLSAFNLDSTNVQRKNGDPGSYFGFSLAMHLQLAPEDKRIL
LVGAPRAKAMSGQTSKVTGGLYNCDMTSTSTSCSRVQFDNNENINEESKENQWMGVTVNS
QGPGGKVVTCAHRYQRRSLGTSESRDIIGRCYVLGQNLDIDPNTDEEGDAWHFCQGRTTG
HERFGSCQQGLSATFDKDYHYLIFGAPGAYGWKGVVRLEQKNETFLDVGIYDDGPFETGD
ERNRNPNLVPAPSNSYLGFSLDSGKSLIEKGTLTVVAGAPRANHSGAVVLMKKEGYNSMS
EVYTLEGQGLASSFGYDLTVLDLNNDGWQDIVVGAPQYFEKDGKIGGAVYVYVNKLGKWN
TVKPIRIDGPKDSMFGLAVEKLGDINQDGYHDFAVGAPNQGAGQVYIYHGVASGVISKEA
SQILSGEAFGVKMFGYSLAGNMDLDKNAYPDLAVGSLSDSVFVYRARPVIKIQKEVNFTP
KEINLTEKNCGENFCLDIEACFTFTAEPKSYAPRLTVAYSLEADADHRKKRLNPRAVFKD
GSKNSYESKGTITLDTKGKKQCITRKLMIQDNIKDKLHGIPIDVSVDIQDGNRKRRQSST
GQLAPVLDAKESSKIRSEVNFLKEGCGPDNVCQSNLQVEYRYGYRTTNNDTFTPLKLEDN
VPVFSLSDQKDIALEVTVTNLNGDDAHEASVLASIPRSLTYSAYRVLKNVAQVSCVANKD
GSEAGCELGNPFKRDAQTTFYILLGTSGITSNTTDLEIVLQLNTTSNQDKLASVKAKAKV
AIMLQLSISGLAQPSQVYFSGKSKGETAIKSESEMGTAITHRFSIINLGKSLKDFGTATL
DIDWPKETEDGKWLLYLMKISATGVDQIDCTPKDEINPLSKEPSKTRKRRETENTLGIKE
GTISRLLDGKKSKTLSCGKGATCVRITCPLRGMDSNAVFTLNSRLWNSTFIEKYSKLHLV
EVIVKASLNIDSRAKNIVLKNAEFPLKLTVFPERREAQYGGVPWWIIVLSILFGLLLLAL
LAFLLWKCAFFKRAKYEDKVPSYNAVRIRREERTPNPVTDNWENVEKKPWMTTWHDKEHF
S
NT seq 3246 nt   +upstreamnt  +downstreamnt
atggaggtcaggatcacatgtgggctgtggttcttcgcctttattttgggatgtgggcga
ctatcggcgttcaacctggacagcacgaatgtccagcggaagaacggagacccgggcagc
tacttcggcttctctctcgccatgcacttgcagcttgctccggaggataagagaattctg
ctggttggtgccccgagagcaaaagccatgagtggccaaacatccaaggtgacaggagga
ctgtacaactgtgacatgacctccacctcaacgtcttgctccagagttcaatttgataac
aatgagaacataaacgaagagagcaaagagaaccagtggatgggagtgaccgtcaacagt
caggggccaggaggaaaagttgtgacctgtgcccatcgctaccagcgccggtcattgggg
acctcggagtcccgagacattatcggtcgttgctacgtgctggggcagaacttggacatc
gatcccaacacggacgaagagggggatgcatggcatttctgtcaaggccgaaccacaggc
cacgagaggttcggctcctgtcagcagggcctctctgccacattcgacaaggactaccac
tacctcatctttggggctcctggagcatacggctggaaaggtgtggtgcgcttggaacaa
aagaacgaaacctttttggacgtgggcatctatgacgacggcccttttgaaacgggagat
gagaggaataggaaccctaacttggtccccgctccttccaacagctacctgggcttctct
ctggactcagggaagagtctgattgagaagggtacgttgacggtggtggcaggagctccc
agagctaaccacagtggagcggtggtgctgatgaagaaagaaggatacaacagcatgtca
gaagtgtacaccctggaagggcaagggctggcctcgtctttcggctacgatttgaccgtg
ctggatctcaataatgatggttggcaggacatagtggtgggagcaccacagtactttgag
aaggacgggaaaatcggaggagccgtctacgtctacgtcaacaaactgggaaagtggaac
acagtcaagcccatcagaatagacggaccaaaggactccatgtttggcctggctgtggaa
aaactgggagacatcaatcaggatggttaccatgattttgcagtgggagctcctaatcag
ggagcaggacaggtgtacatctaccatggagtagcctcaggtgtcatctccaaagaagct
tcacagattctgtccggcgaggcttttggagtgaagatgttcggctactctctggcaggc
aacatggacctggataagaacgcctaccctgacctggccgtcgggtccctctctgactcc
gtctttgtctacagagcccgtccagttataaaaatccaaaaggaagttaacttcacacca
aaggaaatcaacctcaccgagaagaactgtggcgaaaacttctgcttggatatcgaggca
tgcttcaccttcactgccgagcccaagagttacgctcccagactgacggtggcatactcc
ctcgaggcggacgctgaccacaggaagaagcgtttgaaccccagggcggtcttcaaagat
ggctctaagaatagctacgagtcaaaagggacgatcaccctggacaccaaaggaaagaaa
cagtgcattaccagaaagcttatgattcaggacaatattaaagacaagctgcatgggatc
cccatcgatgtgtccgtggacatccaggacggaaaccgtaaacgcagacagagctcgacc
ggtcagctggcgcctgtcctggacgccaaggagtcctcgaagatacgatctgaggtgaat
ttcctgaaggaaggttgtggacctgacaatgtctgtcagagcaacctgcaggtggaatat
cgctacggctacaggacaacaaacaacgacacgttcactccattaaaactggaggataac
gtgccggtgttttcgctcagcgaccagaaggacatcgctttggaggttacagttaccaat
ttaaatggagacgatgcacacgaagcctctgtgctcgccagcatcccccgctccctcacc
tactctgcttaccgtgttctaaaaaatgtggcgcaggtatcctgtgtagccaataaagac
ggttctgaggctggttgtgagcttggaaaccccttcaaacgtgacgcacagacgaccttc
tacattctcctgggtacatcgggcatcacttcgaacactaccgacctggagattgttctt
cagctaaacacaacgagcaaccaggataaattagcctctgttaaagcaaaggcaaaggtg
gctatcatgttgcagctgtctatatcgggactagcccagccatctcaggtgtacttctca
ggaaagtccaagggtgagacggccattaagtctgagagtgaaatgggcactgccatcaca
catcggttcagtataatcaatctggggaagagcttgaaagactttggcactgccaccctt
gacatcgactggccgaaagagacagaggatgggaagtggctgctgtacctgatgaagatc
agcgccaccggagtggaccagatagactgcactcctaaagacgagatcaaccctcttagc
aaggagccaagtaaaaccaggaagagaagagaaacagaaaacactctgggaattaaggag
ggcactatctcacgtttacttgacgggaagaaatctaaaactctgtcctgtggcaaaggg
gcaacatgtgtaaggataacgtgccccctgcggggcatggacagtaatgcagtcttcact
ctaaactctcgcctctggaacagcaccttcatagagaaatattccaaactccatctcgtg
gaagtgatcgttaaggcctccctgaatatcgatagtagagcaaagaacatagtgctgaaa
aatgctgagtttccgctgaaactgacggtgttcccagagaggcgtgaagctcagtatgga
ggcgtgccgtggtggatcatcgtgctgtccatcctgttcgggctgctgctgctggccctg
ttggctttccttctgtggaagtgtgcattttttaagcgtgccaaatatgaagacaaggtt
ccaagttacaacgctgttcggataagacgggaggagagaacgccaaaccctgtgactgat
aactgggaaaacgtggaaaagaagccctggatgacaacctggcacgacaaagaacatttt
tcctaa

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