Pseudochaenichthys georgianus (South Georgia icefish): 117462890
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Entry
117462890 CDS
T09629
Symbol
ticam1
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04217
Necroptosis
pgeo04620
Toll-like receptor signaling pathway
pgeo04621
NOD-like receptor signaling pathway
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117462890 (ticam1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117462890 (ticam1)
04621 NOD-like receptor signaling pathway
117462890 (ticam1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117462890 (ticam1)
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Gene cluster
GFIT
Motif
Pfam:
TRIF-NTD
TIR_2
CAP12-PCTIR_TIR
Reprolysin
DUF6166
Motif
Other DBs
NCBI-GeneID:
117462890
NCBI-ProteinID:
XP_033961144
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Position
17:complement(21873332..21876148)
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AA seq
578 aa
AA seq
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MSHVEQESQGTGLRDVFDIVIKAPPNRLLSLTFQLGESPQDHIIHSLCLIVLQKEERALN
KLQMLKNNFLAQLLAEKWQMSAGKLEDFATRCGHSQEFTGESLALLARIFKVLSEQRLCD
TSLRNLAYKRALSSDNQETSNCEYLEYDKFREEAKVVCGPQFAEWLSSSKKPMSDQDPHG
PPDKESTTLKVDLSQDQCERAYSLPSPLQATSSMPSYPTHLEISLPPTASYNSVTPETSG
ASEINTPALVVGESQTSQPESSEPPMFGAKKPLKMEGAAEGGELDSLITRKETLHQTSKP
TTEPTFALPTATSHSKMPAPKEVHESEGAELEEEPIFYAFVIFHAAEDADVAESMKERLE
EVIHIEGATFSEGFAVPGRSTLRSVEDAINNSAYIVLLLTRNFDRMQMMEADSALVNSIY
KTHKYGTVIPLLPRENSLPKDSFPMVLKTINTLDENRNFERKVRRVFSPTQIKKQRAIWN
TEQKVKMQMQRQETLKNLNRYQKQLIRECTKAELLQKDNLRLLLEQQLHLGTRGPPEQPH
IHINNAKYIMIGNDSRMNVGSDGHADTDDSINRDEDCS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgtggaacaagaaagtcagggtacaggactgagagacgtcttcgacatagtg
atcaaagcaccgccgaatcgactgctaagtctgacattccagttgggtgagtctccgcaa
gatcatatcatacattccctatgtctgatcgttctccagaaagaggagcgggccctgaac
aaactccagatgctgaaaaacaacttccttgctcaacttctggctgaaaagtggcagatg
agtgcaggcaaattagaagattttgccactcgttgtggtcattcgcaagagtttacagga
gaatctttggcactgttggctcgtattttcaaggttttatcagaacagaggctttgtgat
acaagtctgagaaatctggcgtataagagagccctttcaagtgacaatcaggaaacaagc
aactgtgagtacctggagtacgacaagtttagggaggaagctaaagttgtctgtgggcct
cagtttgcagagtggttgagctcttcgaagaaaccgatgtctgaccaggatccccatggc
cccccggataaagaaagtacaactttaaaagtagacctgtctcaagatcagtgcgagaga
gcttacagtctgcctagtccactgcaggcgacctcttcaatgccctcatatcccactcat
ctggagataagtttacccccaacagcctcatacaacagcgttaccccagaaacatcaggt
gcttccgaaataaacacccctgccctcgttgttggtgaatctcaaacctctcagcctgaa
tccagtgaacctccgatgtttggtgcgaagaaacccttaaagatggagggagccgcagag
ggcggtgagttggacagtcttatcactcgcaaagagactcttcaccaaacctccaaacca
accactgaaccaacctttgcattacccaccgcaaccagtcattccaagatgcctgctcca
aaggaagtgcatgaaagtgaaggtgcagagttggaggaagagccaattttttacgctttt
gttatcttccacgcagctgaagatgcagatgtggctgaaagcatgaaggaaaggctggaa
gaggtcattcatattgagggtgcaactttttctgagggctttgctgttccagggaggagc
actctgaggagtgtggaagatgctatcaacaactcggcctacattgttctgctgcttacc
cgcaactttgaccgcatgcaaatgatggaggcagactctgctcttgttaactccatatat
aagacacacaaatatggcacagttattcctctcctgccaagggagaacagcctgcctaaa
gatagcttccctatggttttgaagacaataaatacactcgacgagaataggaactttgaa
aggaaagtacgaagggtattttctccaacgcaaattaaaaaacagagggcaatctggaat
acagagcagaaagtgaaaatgcagatgcagagacaggagactctgaagaatttaaatagg
taccaaaagcaattaattcgtgagtgtacaaaagcagagctgctgcagaaagataacctg
aggcttttattggaacagcaacttcacctcggcaccagagggccaccagaacagccacac
atccacattaataacgctaagtacataatgattggtaatgactctcgaatgaacgttggt
tcggatggacatgcagacacagatgattcaattaacagagatgaagactgctcctaa
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