Pseudochaenichthys georgianus (South Georgia icefish): 117462979
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Entry
117462979 CDS
T09629
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117462979 (fubp1)
03041 Spliceosome [BR:
pgeo03041
]
117462979 (fubp1)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117462979 (fubp1)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117462979 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
KH_Vigilin
FUBP_C
Secretin_N
Motif
Other DBs
NCBI-GeneID:
117462979
NCBI-ProteinID:
XP_033961256
LinkDB
All DBs
Position
17:34249807..34261870
Genome browser
AA seq
675 aa
AA seq
DB search
MADYSSVAPPSSNSGPGMNDAFKDALQRARQVRTSFDQIAAKIGGDVPSAPQTNDFGYGG
QKRPLEDAGGYFPMPNLNIDQPETKKVATNDAFSGMGGMGGPPRSLSEEFKVPDGMVGFI
IGRGGEQISRLQQESGCKIQIASDSGGMPDRSVTLTGGPESIQAAKRLLTEIVEKGRPAP
AFNHNDGPGTSVQEIMIPATKAGLVIGKGGETIKGLQERAGVKMVMIQDGPQNTGADKPL
RISGEPFKVQQAKEMVMELIRDQGFREQRGEYGSRVGGGHGGGGNGGGGNGGGNGGDGGG
GNGGDSLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGTPPERIAQIMGPPDQ
AQHAAEIISDLLRSVQAGGPPGGHGGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLI
IGKGGETIKGISQQSGARIELQRNPPPNADPNIKMFTVRGSPQQIDYARQLVEEKIGGPV
TPMGGPHGPPGGGHGGPGPHGPPGPPGPPGAPMGPYNAGPYNQGPPGPHGPPAPYQPQGW
GNGYPHWQQGQPDPSEHLQDKAAADANAAAWAAYYAQYSQQPQAPMTPTSGAPGTTQSNG
QGQQSQQPQDYTKAWEEYYKKQGQAAPQATAAAAAASQPGGQPDYSAAWAEYYRQQAAYY
GTANPGAAPQAPQGQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacagcagcgtggctcctccgtcctctaactccggcccaggcatgaatgac
gcttttaaagacgctctacagagagcacggcaggtaagaacatcatttgatcaaattgca
gcgaagatcggcggtgatgttccttcagcgccccagacgaacgacttcggctacggaggc
cagaaaaggcccctggaggacgctggtgggtattttcccatgcctaacctaaatatcgac
caaccagagacgaagaaagtggctacaaacgacgcgttttcaggaatgggaggaatgggt
ggtcccccaaggtcattatcagaggaattcaaggtcccagatggcatggttggattcatt
attggaagaggaggcgaacaaatctctcgcctgcagcaagagtctggatgtaagatacag
attgcgtcggacagtggaggtatgcccgataggtcggtgacactgaccggaggaccagaa
tccatccaggccgcaaagagactacttacagagatagttgagaaggggcgtccagctcca
gcattcaaccacaacgatggccccggaacgtcggtccaagagatcatgatccctgccact
aaagccggactcgtcattgggaagggaggagaaaccatcaaaggccttcaggaaagagct
ggagtgaagatggtcatgatccaagatggaccccaaaacacaggcgctgataagccactc
cgcatttcaggagaaccctttaaagttcagcaagccaaagagatggtgatggagctgatc
agagatcaaggcttcagggagcagaggggagagtacggatcaagagttgggggcggacac
ggcggtggtggtaatggtggaggaggaaatggtggtggtaatggtggcgacggcggagga
ggaaatggtggagacagcttggatgttcctgttcctcggtttgcagtgggaattgttatt
ggcagaaatggagagatgatcaagaaaatacagaacgacacaggcgtcagaattcagttt
aaaccagatgacggcaccccccctgagaggatagcacagatcatgggcccccccgaccag
gcgcagcatgcagcagaaatcatttccgacctgctcaggagcgttcaggctggcgggccc
ccaggaggacacggagggggccgagggcgtggccgcgggcaagggaactggaacatgggc
ccccctggtggtctgcaggagttcaccttcactgtcccaaccatgaagaccggcctcatc
atcggaaaaggcggtgagacgataaagggcatcagccagcagtctggagccaggatcgag
ctgcagagaaatcctccccccaacgccgaccccaacatcaaaatgttcacagtacggggc
tccccccaacagatcgactacgccaggcagctagtcgaggagaaaatcgggggacctgtc
actccgatgggcgggccacacggcccccccggtggaggacatggaggtccaggcccacac
ggccctcctggaccacctggaccccccggggctcccatgggtccatacaacgccgggcca
tacaaccagggacccccaggacctcacggtccaccagcgccttaccagcctcagggatgg
ggcaacggataccctcactggcaacaaggacagccggatccaagtgagcacctacaagat
aaagcagcagcagacgccaatgcagcagcgtgggcagcttattacgctcagtacagccag
cagccgcaggcccccatgaccccaacgagcggagctccaggcacgactcagtccaacggc
caaggtcaacagagtcaacaacctcaggattacacaaaagcctgggaggaatattacaag
aaacaaggtcaagcggcccctcaggccaccgcggccgcagcagctgcctctcagcctggc
ggtcagcctgactacagcgcagcctgggcggagtactaccgccagcaggctgcgtactac
ggcacagcaaacccaggagcagcaccacaagcccctcagggccagtaa
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