Pseudochaenichthys georgianus (South Georgia icefish): 117462992
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Entry
117462992 CDS
T09629
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03272
Virion - Hepatitis viruses
pgeo04382
Cornified envelope formation
pgeo04514
Cell adhesion molecules
pgeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117462992 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117462992 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117462992 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117462992 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117462992 (cldn1)
04147 Exosome [BR:
pgeo04147
]
117462992 (cldn1)
04515 Cell adhesion molecules [BR:
pgeo04515
]
117462992 (cldn1)
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117462992 (cldn1)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117462992 (cldn1)
Exosomal proteins of colorectal cancer cells
117462992 (cldn1)
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
L1 family
117462992 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF6541
DUF3112
OppC_N
Motif
Other DBs
NCBI-GeneID:
117462992
NCBI-ProteinID:
XP_033961282
LinkDB
All DBs
Position
17:7690360..7699978
Genome browser
AA seq
211 aa
AA seq
DB search
MANAGIQLLGFTLAFLGFIGSIASTIMVEWKASSYAGDNIITAQAMYEGLWKSCVSQSTG
QVQCKVYNSLLQLPGIVLGTRGLMMASIIFSLFSILVDVVGMRCTTCMAERPEQKDKVAL
AGGVLFIIAGLLALVGVSWYGHRIAQEFYNPFTPTNSRYEFGSALYVGWGAACLTMIGGG
FLCCNCSGGGSGKAPNYPASSSSGQPARDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcagggatacagcttctgggcttcacgctggccttcctgggcttcatcggc
tcgatagcttccacaatcatggtggagtggaaagcttcatcgtatgcgggagacaacatc
atcacagctcaggccatgtatgaagggctgtggaagagctgtgtgtcacagagcaccggg
caggtgcagtgcaaagtgtacaattcccttctccaactgccagggattgtgctgggcacc
cgagggctgatgatggcctccatcatcttcagcctcttttctatcttggtggacgtcgtg
ggcatgaggtgcaccacctgcatggcagaacgaccggagcagaaagacaaagtggctcta
gctggaggggtcctcttcattatcgctggtctgcttgcactggtgggagtgtcctggtat
ggacacagaatagcccaggagttctacaacccattcactcccactaattccaggtatgag
tttgggagtgcactgtatgttggatggggagctgcctgcctcaccatgataggagggggc
ttcctctgctgtaactgctctggggggggctctgggaaagctccaaactacccagcgtcc
agctcctcaggtcagccggcgcgggactacgtatag
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