Pseudochaenichthys georgianus (South Georgia icefish): 117463372
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Entry
117463372 CDS
T09629
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta isoform X1
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117463372 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117463372 (chrnb1)
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117463372 (chrnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Baculo_ME53
Motif
Other DBs
NCBI-GeneID:
117463372
NCBI-ProteinID:
XP_033961476
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All DBs
Position
18:complement(13013059..13061287)
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AA seq
494 aa
AA seq
DB search
MKGLDLLLLACCVCCLSTLGGALDEEKSLMVKLFTNYNLKVRPALSPEDRVVVRVGMVLS
SLVGLNMKNEEMSTVVIMNLEWTDYRLQWKPKEHDGINVMRIPAVKVWLPDMVLFNNNDG
VFGVALHVRVQAYYNGRVTWTPPALYCSSCGVKVTYFPFDWQNCTMQFRSYTYDFTEIDV
QYALDSNGKEIREIQLDEAYTEGGEWQIIHRPCRRNMNDDDYEDMTFYLILERKPLYYVF
NIILPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLANKIPETSLGVPIIVN
YIMFTMILVTCSVILSVVVLNLHHRSANTHCMPMWIRMIFIHILPPVLCMLRPKVETPLS
LKTQPRREKRIVTISKVADEYFIRKPDSSILFPKPNRYNPEGMVTDMRKFIDGPSSYLSL
PEELKSAMDAITYIAEALQAEKDCVALKEDWQYVAMVVDRMFLWIFVIITTVGTLAIFAM
ASFNHTPTDPFKAP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcctggatctgctcctgctggcatgttgtgtatgctgcctgagcacattggga
ggtgcgttggatgaggagaagtctctgatggtgaagctctttaccaactacaacctaaag
gttcggccagcattgagccccgaagatagggtggtggttcgagtggggatggtcctctcc
tccttggttggactgaatatgaagaatgaagaaatgagcacagttgttatcatgaatctg
gaatggacggattatcggttgcaatggaaacccaaggagcatgatgggattaacgtgatg
cgaatccccgctgtgaaggtttggctgcctgacatggtcctcttcaataataatgatgga
gtgttcggtgtggccctgcatgtccgtgtccaggcgtattacaatggcagagtaacatgg
acgccccctgccctgtactgcagctcttgtggagttaaggttacatatttcccgtttgac
tggcagaactgcaccatgcaattccgctcctacacgtacgacttcacagaaatcgacgtg
cagtatgcgctggactcaaatgggaaggagatcagggagatccaactggacgaggcttac
actgagggtggcgagtggcaaatcatacacaggccgtgcaggaggaacatgaacgacgat
gactatgaggacatgaccttctacctcatcctggagaggaagcctctgtactacgttttt
aacatcatcctcccctgcatcctcatcaccatcatcgccatcttcaacttctacctgcct
cctgacgcaggagagaagatgggtctgtccatcaacgtgttgctcaccctcactgtgttc
ctgctgctgctggctaataagatccctgagacttcactgggtgtccccatcatcgtcaac
tacatcatgttcactatgatcctggtcacatgttcagtcatcctcagtgtggttgtcctt
aatctgcaccaccgctcggccaacacccactgcatgcccatgtggatccgtatgatcttc
atccacattctgcctcctgtcctgtgcatgcttcgacccaaagtagagacccccctgtcc
ctgaagacccagccccgccgggaaaaaaggattgtcaccatcagcaaggtggctgatgaa
tacttcattcgcaagccagactcctccatcttgttcccaaaaccaaacaggtataatcca
gaggggatggttacagatatgagaaagttcattgacggccccagtagctacctgagtcta
cccgaagagctcaagtcggccatggacgccatcacttatatcgctgaggccctgcaggcg
gagaaggactgtgttgctctgaaggaggactggcagtacgtggccatggtggtggaccgc
atgttcctctggatcttcgtcatcatcaccaccgtggggactttggccatcttcgctatg
gcaagctttaaccacacgcccaccgaccccttcaaagccccctga
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