Pseudochaenichthys georgianus (South Georgia icefish): 117463378
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Entry
117463378 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: multiple PDZ domain protein-like
KO
K06095
multiple PDZ domain protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117463378
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
TetR_C_11
BSP_II
Motif
Other DBs
NCBI-GeneID:
117463378
NCBI-ProteinID:
XP_071062681
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All DBs
Position
18:complement(18518952..18583637)
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AA seq
2077 aa
AA seq
DB search
MIETMDTQRALQAVERLQARLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQHLRD
QESLPGSCETDLCDHVAAVNPNGGHVSYSDISASTLINGKPSSEEFEHLVHSMAQGRYLA
HVDLQKPESGGLGFSVVGLKSENRGELGIFIQEIQAGSVADCDGKLREADQILAINGKIL
DQTVSHQQAIGLLQSTSERVQLTVARGPIPQLTSPAVSRTPSAASTLSANSSAWQHVETI
ELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGRLRSGDHILRIGDTDLLGMGSEQV
AQVLRLCGNRVKLVVTRGPLEEGPSVAAVMPVVLPTVNEQGYEEEEEEEEEEEEEEEEED
EAFDVSLTKNAQGLGITIAGYVGDKNSEPSGIFVKSITKDSAVDQDGRVHVGDQIIAVDS
VDIQGFTNQQAVEVLRHTGHTVHLKLIRRGFRPEDLPSAVAPSIGVLPSHTTIPTTTIVL
EELELERRKAEEEAAAQVAPDEKPPQTKSEVSDVGSTSDQLTDDTHGMKLTAFEEEELMK
KWLEILGPSNEVVVAQVEKFSASSGLGISLEASSGHHYIRSVLPEGPVGCCGKLFSGDEL
LEVNGLSLIGETHKEVVRILKELPLCVYMTCCRPAPHLQTDMHDVQPEILSTVSALKKQI
DLSIVRAAADSEVKAAAAAAAVTEEKVTEEVVASPLAMWELEIHNIELEKGEGGLGFSIL
DYQDPLDPAKTVIVIRSLVPGGVAEHDSRLLPGDRLMYVNSTELENGSLEDAVQALKGAQ
LGMVQIGVSKPLPGICGYSHSPHPYGEQEITPSSTIHSFDFNNILVEEGEEEGPAEGNVY
RAEPALIDTSEAEQLDHSYSTMDDDSFQASMMALHGSSCSADLDYLHASTPKLTARLDLL
EERPGFETPPSLEDDFPAFSPQHSASFSPPSLRGPTFNSLLSPSDHFLAPHADTEEPEQC
FNSEAGTGALDEPAETPMSFEDIGDINMIKDEDAAVRGEDADEEALTSGSSFERTITVVK
GNSSLGMTVSAMKASLGMLIRSIIHGRSISGTGAXGVGDLILAINGETTAHMTNAQARAM
LRRHSLIGPDLGITYVPAEYLEEYKASLEQTTEEVSDEIHAVPAPDPKDIPNLPEREDGE
GEESASTAIGTQPRKVELFRAPGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHILEDSPA
GQNGTLKTGDRIVEVDGVDLRDASHEEAVEAIRKGGNPVTFLVQSIIHRPRSSGADSGED
RAAAVTKDNKDKEAYSYSRLFLRLSPTNPFTPTPFKSVKREAVKAPPTSAVLPLPVMPHV
GETDTDTLTESPGGPAEEEEEEEQRVEQQEEEEDEFGYNWKNVSQRYGGLSGVLHMMELE
KGRTGLGLSLAGNRDRSHMSVFVVGIDPNGAAGRDGRMVVGDELLEINGQVLYGHSHQNA
SSIIKSAPSRVKIIFVRNTEALQQMAVGPVREQEGGDPEDPPTEPETTAANGDTLKYIHH
AIKLKEDGGLGITFVEGNTENGVEIQSISEVRGHTGKEGCMRPGDRLLTVNGESVLGYTV
EQVDALLRTCKGPVKLTFSSLPSTSEDGDCSDGILPGFPSMHSIAATTLSQPEAEAVMSP
SRSSTPTTLTCDPTTCPIIPGCETTINIFKGRTGLGLSIVGGCDTLLGAIIIHEVYEEGA
ASKDGRLWAGDQILEVNGIDLRVASHDEAINVLRQTPQRVRLVVFRDEAQYKEEDLWDSF
SVELHKQPGQGLGLSIVGRRNDTGVFVSDIVKGGLVDTDGRLMQGDQILSVNGEDVRTST
QEAMAALLKCCVGPINMEVGRFKAGPFHSERRLSQSSQMSENGSTRLVSQADNGPTDPDK
PNMCLDTQEHQETRTVEFTKGPHDSLGVSIAGGVGSPLGDIPIFIAMMNPVGLAAQTQQL
KIGDRIVSICGSSAEGMTHAQAVSLLKSATGTIQLQVVAGGDTSVTGPPPEPPAAPLTPS
CIFQDDLGPPQYKSINLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFGKGAAAEDGRLKR
GDQIMAVNGQTLEGVTHEEAVGILKRTKGTVTLTVLS
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaacaatggacactcagcgtgccttgcaggcggtggagcgtctccaggcccgg
ctgaaggagcggggggaggtgcccaccgaggagaagctcagcctgctcaagtctgtgctc
cagagccccctcttccaccagatcctcgccctgcagaagtccgtgcagcacctcagagac
caggagagtctcccagggtcgtgtgagactgacctctgcgatcatgtcgcagcagtcaac
ccaaacggcggccatgtttcctactcagacatttcagcttcaactctcatcaacggcaag
ccgtcgtctgaggaatttgaacatcttgttcactccatggcgcaggggcgctacctggca
catgtggatctgcagaagccagagtcagggggtctgggcttcagcgtggtgggactgaag
agcgagaaccggggagagcttggcatcttcatccaggaaattcaagcaggaagtgtggcc
gactgcgatgggaagctgagggaagcggatcagatcttagccatcaacgggaagatcctg
gaccagacagtgagccaccagcaggccattggcctcctgcagagcacctcagagagggtc
cagctcaccgtggccagaggacccatcccccagctcaccagccccgcagtgtcacgtaca
ccctctgcagccagcaccctgtctgccaactccagcgcgtggcagcacgtggaaacgatc
gagctggtgaacgatggcactggcctcggcttcggtatcgtgggaggaaagaccaccgga
gttattgtgaagaccatccttcctggaggcatcgctgatcaggatggccggctgcgcagc
ggggaccacatcctgcggatcggggacactgaccttctggggatgggcagcgagcaggtg
gcccaggtcctccggctgtgtgggaaccgggtgaagctggtggtgacccgggggcccctg
gaggagggcccctctgtcgctgctgtcatgcctgtggtgctgcccactgtcaacgaacag
ggctatgaggaggaggaggaggaggaggaggaggaagaagaggaggaggaagaggaggat
gaagcgtttgatgtgagcctgacgaagaacgcacagggtctgggcatcactatcgccggc
tatgttggagataaaaactcagagccctctggcattttcgtgaagagcataacaaaagac
agcgctgtagatcaagatggccgcgtccatgttggagaccagataatagctgtggacagc
gtggacatccagggcttcaccaaccagcaggcggtagaggtgctgcgccacacaggccac
acggtgcacctcaagctgatccggaggggcttcaggcccgaagacctcccctccgctgtg
gcccccagcatcggcgtgctgccctcccacaccaccatccccaccaccaccatagtgctg
gaggagctggagctggagaggaggaaggcagaggaggaggctgcggcacaagtcgcccca
gatgaaaagccaccgcagacaaagagcgaagtatctgatgtcggctcgacctcggatcag
ctgacagacgacacacatgggatgaagctcacagcctttgaggaagaggagctgatgaag
aagtggctcgagattctgggtccaagtaatgaagttgtagtggctcaggtggagaagttc
agtgcgagcagcgggctgggcatcagtctggaggcgagcagcggacatcactacatccgc
tccgtcctacctgagggacctgtgggttgctgcgggaagctcttcagtggagatgaactg
cttgaggtcaacggcttgtctctgattggtgaaacgcacaaggaagtggtgaggatcctg
aaggagctccctctctgcgtctacatgacctgctgcagacccgccccccacctgcagact
gacatgcacgatgtccaaccagagattctgtctacagtgtctgcattaaagaaacaaata
gacctgagcattgtgcgtgcggctgcagactcagaggtgaaggcggcggcggcagcagca
gcagtgacagaggaaaaggtgacggaggaggtcgtagcctctcctctggccatgtgggag
ctggagatccacaacatcgagctggagaaaggagaaggaggattgggattcagcatcctc
gactaccaggacccgctggacccggccaagacggtgatcgtgatccgctctctggttccc
ggcggcgtggcggagcatgacagccggctgctgccaggagaccgcctcatgtacgtgaac
agcacggagctggagaatggcagcctggaggacgcagtgcaggcgctgaagggggcccag
cttggcatggtgcagataggagtgtccaaaccgctgcctggaatatgtggatattcccac
tctccacacccctatggtgagcaggaaattactccatcatccaccatccattcatttgac
ttcaacaatattttggttgaagaaggagaggaggaaggaccggctgagggcaacgtttac
cgagcagagccggcattgatcgacaccagcgaggccgaacagttagatcattcttactcc
acgatggacgacgactctttccaggcgtccatgatggctctgcacggcagcagctgcagc
gccgacctggactacctgcacgcatctacacccaagctgacggctcgtctcgacctgttg
gaggagcgacccggctttgagacaccgcccagccttgaagacgatttcccagccttctcc
ccgcagcactctgcctctttctcccctcccagtctcagaggcccgacgtttaactcctta
ctgagcccttctgaccacttcctggcaccacacgctgacacagaggaaccagagcagtgt
ttcaactctgaagcagggaccggagcattagacgaacctgcagagacacccatgtctttt
gaagatattggagatataaatatgataaaggatgaagacgctgctgtgagaggggaggac
gctgatgaagaagcgctgacctcggggagcagctttgaaaggacgatcacagtcgtgaag
ggcaactccagcctggggatgactgtgagcgcgatgaaggccagtctggggatgctgatc
cgcagcatcatccacgggcgctccatcagcgggacgggcgccnntggggtcggggatctg
atcctggccatcaacggagagaccaccgctcacatgaccaacgcccaggcccgcgccatg
ttgcgacgacactcactcatcggacccgacctgggaatcacatatgtacctgcagagtat
ctggaggagtacaaggccagcctagagcagactacagaggaagtctcagatgaaatccat
gcagtcccagctccagatccgaaagatattcctaacctccctgagcgggaagacggagag
ggagaggagagtgcctctacagcaattggaacccaacccaggaaagtggagctcttccgg
gcgccaggcaagtctctgggtatcagtattgtcgggggccgggggatgggcagtcggctg
agcaacggagaggtgatgaggggcatcttcatcaaacacatactggaggacagtcctgcg
ggacagaacgggaccctgaagactggagacaggatcgtagaggtggatggagtagatcta
agagatgccagtcacgaggaggcagtggaggctatccgcaagggaggaaaccccgtcacc
ttcttggttcagagtatcatccacaggcccagatcttcgggagcagactccggagaggac
agagctgcagctgtgacgaaagacaacaaggacaaggaggcttacagttacagtagactt
ttcctccgcctctccccaactaaccctttcactcctaccccatttaagtctgtgaagcgt
gaagcggtgaaggcacctcccaccagcgccgtcctccccctgccggtgatgccccatgtg
ggggagactgacaccgacacactgacggagagtcctggaggacctgcagaggaagaggag
gaggaggagcagagggtggagcagcaggaggaagaggaggatgagtttggatacaactgg
aagaacgtctcccagcgttacggcggcctctcgggggtcctgcacatgatggagctggag
aaggggaggacgggcctgggtctcagcctggccgggaacagggaccgctcccacatgagt
gtgttcgtggtgggcatcgaccccaacggggcggcgggcagggatggacgcatggtggtg
ggggacgagctgctggagatcaacgggcaagtcctctacggacacagtcaccagaacgcc
tcctccatcatcaagagcgctccttccagagtcaaaatcatctttgtcaggaacacggag
gcgctgcagcagatggctgtgggaccggtgagagagcaggaggggggagaccctgaggac
ccccccactgagccagaaactactgctgctaacggagacactttgaaatatattcatcac
gccataaagctgaaggaggacgggggactgggcatcaccttcgtggagggaaacacagag
aacggagtggagattcagagtatatctgaagtgagaggacacacagggaaggagggctgt
atgagaccaggggacagactcctaactgtgaacggggaatcggtgctcggctacaccgtg
gaacaggtggacgctctcctgaggacatgcaaaggtccggtgaagctcaccttctcgtct
ctcccgtccaccagtgaggatggggattgctccgatggcatcctcccaggctttcccagc
atgcatagcatcgcagcaacgactctgagtcaaccggaggcagaggcagtgatgagtccg
agtcgctcctccacccccaccacgctgacctgcgaccccacgacgtgtcccatcatcccc
ggctgcgagacgaccatcaacatcttcaagggccgcaccggcctcggcctcagcatcgtg
gggggctgcgacaccctgctgggggccatcattatccatgaagtgtatgaagaaggagct
gcttctaaagatggcagactctgggcaggagaccaaatcctggaggtgaacggcatcgac
ctgcgagtagcgagtcacgatgaggcgatcaacgtcctgcggcagaccccccagagggtc
cggctggtggtcttcagggacgaggcgcagtacaaggaggaggacctgtgggactccttc
agtgtggagctgcacaagcagccgggacagggcctgggcctgagcatcgtggggaggagg
aacgacaccggagtgtttgtgtctgacattgtgaagggggggctggtggacactgacggc
cggctgatgcagggcgatcagatcctgtccgtcaacggggaggatgtgaggacgagcacg
caggaggccatggctgccctgctcaagtgctgcgtggggcccatcaacatggaggtgggg
aggtttaaagccgggcccttccactctgaaagaagactctctcagagcagtcagatgagt
gagaatggcagcaccaggttggtctctcaggcagacaatggccctactgaccccgacaaa
cccaacatgtgtctagacactcaagagcatcaggagaccaggacagtggagttcactaag
gggccccatgactctctgggggtcagtatagcggggggcgtgggcagccctctgggggat
atccccatcttcatcgccatgatgaaccctgtgggcctggctgctcagactcagcagctc
aaaattggggaccgcatcgtcagtatctgtgggagctcggctgaaggcatgacccacgct
caggctgtcagtctgctgaagagcgccacaggcacaatacagctgcaggtggtagcaggc
ggcgacacctctgtgaccggaccccctccggaacccccggctgcacctcttactcccagc
tgcatcttccaggacgacctcggcccccctcagtataaaagcatcaatctggagagagga
cctgatggcctgggcttcagtatagtgggggggtacggcagcccccatggagacctgccc
atctacgttaaaaccgtgtttggaaagggggcagcggcggaggacggccgactgaagcgg
ggggatcagataatggcggttaacgggcagactctggagggcgtcactcatgaagaagcc
gtgggcatcctgaagaggaccaaaggaaccgtcacactcactgtcctctcataa
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integrated database retrieval system
