Pseudochaenichthys georgianus (South Georgia icefish): 117463399
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Entry
117463399 CDS
T09629
Symbol
rin1b
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117463399 (rin1b)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117463399 (rin1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
RA_3
Motif
Other DBs
NCBI-GeneID:
117463399
NCBI-ProteinID:
XP_033961521
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All DBs
Position
18:5837067..5863083
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AA seq
791 aa
AA seq
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MNMQETGGSHRGSQRAFSVLDRLLLTHPVWLQLSLNQDSALYILLREPVGTFLVRKCSFS
QRKVLCLRATGDNSASSVKECFICEEDSTFALESSALTFPDLCRLVAFYCISRDVLPFPL
QLPEAILKAATHRQLENISHMGQDFWSPPSASEIQNGPVDSGAATSGSQSQQDRFTLLTH
GRPGKLCFINPLFLQLEFNKQPQLIKHSASNKRHRFKRSMRLRLSESSMNLSLEGVGSYS
PPSSLELPGGSERLQKAGANPQRKVHPGAGVLRRTPAVSTGSAEEEDVVSVYVPKTSAKV
EDPLQPKQSAKAQGPGIEVAVLALERRPAPCLAELDSSSSFSSMDEDSDSDSDPESMARA
QTDAYHRPPLVRSRGRGGLHRMSEAFVCFFAPDKRLTRLVEELSRDRRSTFGAMVQDFLL
AQREVLKSLASSPSATSSARVSSVQMLQGLRLFLSQAKCCLLDSGELEPPIETLVPENEK
DLALERAMFSCVLRPLRSHLEKALVALHTQDSSSQRLAQNMIRLKGDVAMERLGVRTGVP
DSREVERVKQKLHLMQRTHSPIDKVLLLLQVCKCVQKAMGSLHGQEVSWDDFLPSLSYVI
VECNKPHILIEVEYMMELLEPSWLGGEGGYYLTSVYASLCLIQSLERDQPFSGCLTAEAE
GALKEWSCRRSRDAQRQKESQQSQRCVRILFQDGERSAVRTLQWSAGETSQALAQLCAST
FAVSDPQLYTLYWRSGGEMRPLPPQAQPQDLASHSEGGPSLSYLRTDHDFSKMRRLTRGG
AVDLSESVCEE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcaggagacgggcggttcccatcgcggctctcagagggcgttcagtgtcctg
gaccggctgctgctcacacaccctgtgtggctgcagctgtcactcaaccaggactccgcc
ctctacatcctgctcagagagcctgtcgggacctttttggtgcgtaaatgcagcttcagc
cagaggaaggtgctgtgtttgagagcgacgggggacaacagtgcctcctctgttaaggag
tgcttcatctgtgaggaggactccacattcgccttggagagctcggcgctcaccttccct
gacctgtgtcgcctggtggccttctactgtatcagcagagatgtgttgcccttcccgctg
cagctaccagaggccatcttgaaagcagcgacacacaggcagctggagaacatctcacac
atgggacaagacttctggagccccccgtctgcttcagagatccaaaacggaccggtggac
tcgggtgcagcaacgagcggcagccagagtcagcaggaccgcttcaccctgctgacccac
gggaggcccgggaaactctgcttcatcaaccctctcttcctgcagctggagtttaacaag
cagccacaactcattaagcacagtgcctccaataaacggcaccgcttcaagcgcagcatg
cgtctccggctctccgagtcctccatgaatctgtccctggagggggtcggctcctactcg
cccccctcgtccctggagctgcccggcggctcggagaggctgcagaaggccggagccaac
ccgcagagaaaagtccatcctggggcgggagtcctgaggagaacccccgccgtgtccacg
gggtctgcagaggaagaggacgtggtgtctgtctacgtgccaaaaacgtctgcgaaggtg
gaggatcctctgcagccgaagcagtcggccaaagcccaggggccgggcatcgaggtggcg
gttctggctctggagcgccgcccggctccgtgcctggccgagctggacagcagcagctcc
ttcagcagcatggacgaggacagtgactcagactcagatcccgagagcatggcccgagcc
caaactgacgcctaccatcggccgccgctcgttcgctctcgaggccgcggcgggctgcac
cgcatgagcgaggcgttcgtgtgtttcttcgctccagataagcggctgacgcgcctggtg
gaggagctgtccagagaccggcgctccaccttcggggccatggtgcaggacttcctcctg
gcgcagagagaagtgctcaaatccctggcttcctctccttcggccacttcctctgcccgt
gtgagctccgtgcagatgctgcagggtctgcgcctcttcctgtcccaggcgaagtgctgc
ctgctggacagcggagaactggagccgcctatcgaaaccctggtgccggagaacgagaaa
gacctggctctggagcgggccatgttctcctgtgtgctgcggcccctcaggtcccacctg
gagaaggctctggttgcgttgcacacccaggacagcagcagccagcggctcgcccagaac
atgatccgcctgaagggggacgtggccatggaacggctgggcgtgcggacgggcgtcccc
gacagccgcgaggtggagcgggtgaagcagaagctgcacctgatgcagaggacgcactcg
cccatcgacaaggtgctgctgctgctgcaggtctgcaagtgcgtccagaaggccatggga
tccctccatggacaggaagtgagctgggatgacttcctgccgtcgctgtcttatgtgatt
gtggagtgtaacaagccccacatcctgatagaggtggagtacatgatggagctgctggag
ccctcctggctgggaggagagggtgggtactacctgaccagtgtgtatgccagcctgtgt
ctgatccagagtctggagcgggaccagccgttctccggctgcctgacagcggaggccgag
ggcgctctgaaggagtggagctgcaggaggagccgggacgcccagaggcagaaggagagc
cagcagagccagcggtgcgttcggatactgttccaggacggggagcggagcgccgtgcgg
acgttgcagtggagcgccggggaaaccagccaagcgttggcccagctgtgcgcctccacc
ttcgctgtgtccgacccgcagctatacaccctgtactggcgcagcggcggggagatgagg
cccctgcccccccaagcgcagccccaggacctggccagccacagcgagggggggccgtcg
ctctcctacctgaggaccgaccacgacttcagcaagatgcggcggctcaccagaggtggc
gccgtggacctgagcgagtcggtgtgtgaggagtga
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