Pseudochaenichthys georgianus (South Georgia icefish): 117463435
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Entry
117463435 CDS
T09629
Symbol
nrxn2b
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin 2b
KO
K07377
neurexin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117463435 (nrxn2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117463435 (nrxn2b)
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117463435 (nrxn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
117463435
NCBI-ProteinID:
XP_071062713
LinkDB
All DBs
Position
18:complement(11233070..12002456)
Genome browser
AA seq
1682 aa
AA seq
DB search
MKRGLRFLGWPLWPIALISLLTTVEMLEFGGAPGQWARYGRWEAGSVGELSFSLKTNISK
ALLLYLDDGGNCDFLELLIADGHLQLRFAIHCAEPATVLMETRLNNDRWHMVLLTRNFRE
TLLMVDGETKVAEVKSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFLGLISNLK
LGDRPPTLLNSQGMQSDLEYHCTKQNPCFNGGFCSIEFGEVRCDCIHTGFKGKYCNEAEE
YAVEGLAHLTLNDQGDSSPVGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQR
NGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNTWHDVRVTRNLR
QHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGC
LRDVVYKNNDFKLELSRLAIDRDPKISLNGDLVFHCEDVAALDPVTFETPESFISLPKWN
AKKMGSISFDFRTTEPSGLLLFSHGRPQGPKEQKPGRELKTDYFAMELLEGYLYLLIDMG
SGETKLRASNKKVNDGEWCHVDFQREGRKGSISVNSRSMPFSSPEGSEILDLDSEMYLGG
LPESKSDLILPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSAFGVSSFCTRELQ
KRCSSAPCGNTGLCKEGWNRYICDCIGTGYLGTNCEIEATVLSYDGSMYLKIIVPVTMHT
EAEDLALRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCSLSKGPET
LFAGQKLNDNEWHTVKVVRRGMNLQLSVDNVTVEGKMTGAHTRLEFHNIETGIMTERRFI
SVVPSNFIGHLQGLTFNGLPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKGSYLAL
ATLQAYASMHLFFQFKTTTPDGLMLFNSGDGSDFIVVELVKGFVHYVFDLGNGPSLMKGN
SDKTLNDNQWHNVVVSRDASNVHTLKIDARTVTQHSNGARNLDLKGELYIGGVTKSMYSN
LPKLIASRDGYQGCLASVDLNGRLPDLIADALHRVGQVERGCDGPSTTCTEESCYHQGVC
LQQWEGFTCDCTMTSYGGSFCNDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFST
QLKEAVLVRVESAKGLGDYLELHIERGKIGVIFNVGTDDIIIEESAVMVSDGKYHVVRFT
RSGGNATLQVDNQPVIERFPSGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNS
QAFIKIGGGEKGRHFQGQISGLYYNGLQVLKLAAEGDPNVQSQGNLRLVGDVPSVLTTDT
TSTTPLADMSTTIMETTTTMATTTTRKQRSPTMRDSVTQNADDLLVASAECPSDDEDLEE
CEPGNGGELVLPIITVDSLAPPSIATRYPVIPPPPTTYRPFLTLLETTKESFPLPNGRPP
CSLDQEDCGETIEVSAYGSGEMTESDDEDYYKNSPLVTDRTVLPPPPGVEGSVQNPRDRH
FSRSPNSHRPPLYSTPTANPEQLSPHIKPAAGGSSSSNNKIPAGKLNTRDQVLLPPAHPS
SDPGHRRVPGITYPPNFPHVPTPDPTSPERGLPGAVEVQQSSSTTGMVVGIVAAAALCIL
ILLYAMYKYRNRDEGSYQVDQSRNYISNSATQSNGALVKEKQPSTAKTVTKNKKNKDKEY
YV
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagggggttacgattcctgggttggcccctgtggcctatagccctcatcagccta
ctcactacagtggagatgctcgaatttggtggggcgcctggccagtgggcccgctatgga
cgctgggaagctggatcggtgggcgagctgagtttcagtctcaagaccaacatcagcaaa
gccttactactctacctggatgacggcggcaactgcgacttcttggagcttttgatagca
gacgggcacctccagctgcgcttcgccatccactgtgccgagccggccacggtgctcatg
gagacacggctgaacaatgaccgctggcacatggtcttgctgacccgcaacttccgtgag
accctcctgatggttgacggggagacaaaagtagccgaggtcaagtccaagaggaaggag
atggcagtggtcagcgacctgtttgtgggcggcattccacctgatgtgcgcctctctgcc
cttacgtccagcaccgtgaagtacgagccaccgttcctgggattgatctccaatctgaag
ttgggggataggcctcctactttgttaaacagccagggcatgcagagcgacctggagtac
cactgcaccaagcagaacccgtgcttcaatggagggttttgctcaattgagtttggagaa
gttcgctgcgactgcatccacaccggcttcaaggggaagtactgcaacgaagctgaagag
tatgctgttgaaggtctggcgcacctgacgttaaacgaccaaggtgactcatctcccgtt
ggtaaggaagagtcagtagccaccttcaagggcaacgagttcttctgctacgacctgtca
ctgacgcccatccagagcagcaccgacgagatcacgctgtccttccgcacgctgcagcgc
aacggcctcatgctgcacaccggcaaatcggcagactacgtgaacctgtccctgaagagc
ggcgccgtttggctggtcatcaacctgggctcgggggcgttcgaggccctggtggagccc
gtcaacggcaagttcaacgacaacacctggcacgatgtgcgcgtcacccgcaacctgcgc
cagcacgcaggcattggacacgctatggtgaccatctcagtggatggtatactgaccacc
actggttacacccaggaagattacaccatgttgggttcagatgacttcttctacatcgga
gggagccccaacaccgccgacctgcccggatcaccagtcagcaacaacttcatgggctgc
cttagagatgtggtgtacaaaaacaacgacttcaagctggagctgtcacggctggccatc
gatcgagaccctaaaatcagccttaatggcgacttggtgtttcactgcgaggacgtggcc
gccctggaccccgtcacctttgagacccccgagtccttcatctccctgcccaagtggaac
gccaaaaagatgggatctatctccttcgatttccgcactacggagcccagcgggctcttg
ctgttcagccacggccgtcctcagggtcccaaagagcaaaagcctggtcgggagctgaag
actgattacttcgccatggagctgctggaggggtatttgtacctgctgatcgatatgggc
tctggagaaacaaagctgagggccagcaacaagaaggttaatgacggagagtggtgccat
gtggatttccagagggaagggaggaaaggctccatctcagtcaacagccgcagcatgccc
ttcagctccccagagggcagtgaaatcctggacctggacagcgaaatgtacctgggtggg
ctgcccgagtcgaagtcggacctcattctgccgccagaggtctggacggcgctgcttaac
tacggctacgtaggctgcgtgcgcgacctcttcatcgatggaaagagccgcgatgttcgc
cgcctggctgagatccagagcgcgtttggggtcagcagtttctgcacccgggaactgcag
aagaggtgcagcagcgccccctgtggcaacacaggcctgtgcaaagagggctggaaccgc
tacatctgtgactgcatcggcaccggatacctcggtaccaactgtgagatagaggcgacg
gtgctgagttatgacggcagcatgtacctgaagatcatagtgccggtcaccatgcacacg
gaggcggaggacctggcgctgcgcttcatgtctcagcgggcgtacggcctgctcatggcc
accacctccaaggagtcagcagacaccctgcggctggagctggacggaggccgcgtcaag
ctcaccgtgaacctcgattgtatcaggatagactgtagcctcagcaaaggacctgagacg
ctgttcgcggggcagaagctgaacgacaatgagtggcacacagtgaaggtggtgcgcaga
ggcatgaacctgcagctgtctgtggataatgtcacagtggaaggcaagatgactggtgcc
cacacacgtctggagttccacaacattgagacgggcatcatgacggagcggcgcttcata
tctgtggtgccctcaaacttcattggccatctccagggcctgaccttcaacgggttgccc
tatttagaccagtgcaaaaatggcgacatctcgtactgtgaactgaacgcccgctttggc
atgcgccacatcattgcagatccggtgacgtttcgaacgaaaggcagctacttagcgtta
gccactttgcaagcttacgcctcgatgcacctcttctttcagtttaaaaccaccacgccc
gacggcctgatgctcttcaactctggagacggtagtgacttcatagtcgtagagctggtg
aaaggatttgtccactacgtctttgatctgggcaatgggccgtcgctgatgaagggcaac
tcagacaagaccctcaatgacaaccaatggcacaacgtggtggtgtcccgggacgccagc
aatgtacataccctcaagatcgacgcacgcaccgttacacagcactccaatggagcccgc
aacctggacctcaaaggggagctgtatatcggtggcgtgacaaagagcatgtacagcaac
ctgcccaagctcatcgcctcccgggacgggtaccagggctgcctggcctccgtggacctg
aacgggagactccccgacctgatcgcagacgccctccacagagtggggcaggtggaacga
ggctgcgatggacccagtaccacctgtacggaggagtcttgctaccatcagggggtgtgt
ctccagcagtgggagggcttcacctgcgactgcaccatgacgtcctatggaggttcattt
tgcaacgatcctgggacaacttacatcttcgggagaggaggagccctcatcacatatacc
tggccccccaatgaccggccgagcacacgggcagaccggctggcagtgggcttcagcacg
cagctgaaggaggccgtcctggtcagggtggagagcgccaagggactgggggactacctg
gagctgcacatagaacggggaaagatcggcgtgatcttcaacgtgggaacagacgacata
atcatcgaggagagcgcagtgatggtgagcgacggcaaataccacgtggtgcgattcaca
cggagcggtggtaacgccacgctacaggtggacaaccagccggtcatcgagcgtttccct
tcagggaactttgataatgagcgcctggctattgctagacaaagaatcccataccgactt
ggtcgggtagttgacgagtggctactcgacaaaggtcgccagttgaccatcttcaacagc
caggcgttcatcaaaataggtggtggagagaaggggcgccacttccagggtcagatctct
ggcttgtattacaacggcctgcaggtgctcaaactggcagccgagggcgaccccaacgtc
cagagccagggcaacctgcggctggtgggggacgtgccctcggtgctcaccactgacacc
acctccaccaccccgctggctgatatgtccaccaccatcatggagaccaccaccaccatg
gcgacaaccaccacccgcaaacagcgctcgcccaccatgagggacagtgtcacacagaat
gcggatgacctcttggtagcatcagctgagtgtcctagcgatgacgaagatttggaggag
tgtgagcctggaaatggaggtgaattagtgttgcccataataacggtggactccttagcc
cccccatccatcgccacacgctacccagtaatccccccgccccccaccacctaccgccct
ttcctcaccttgctcgaaaccaccaaagagtccttccccctgccaaacggacggcccccc
tgctccctggaccaggaggactgcggggagaccatcgaggtgtcggcgtacggctcgggg
gagatgaccgagtctgatgacgaggactattacaaaaactcccccctggtcaccgacagg
actgtcctcccccctcccccaggcgtggagggcagtgtccagaacccccgggaccgccat
ttctcccgctcgcccaactcccaccgcccccccctgtactccacccccacagccaacccc
gagcagctcagcccccacatcaagccggccgccggcggcagcagcagcagcaacaacaag
atccctgccgggaaactgaacacccgggaccaggtgctgctgccgccggcccacccgtcc
tcagatccgggacaccgcagagtcccaggaataacatacccacccaatttcccccatgtt
cccactccagaccccacgtctcctgagcgggggctcccgggcgccgtggaggtgcagcag
tccagcagcaccacggggatggtggtgggcatcgtggccgccgccgccctctgcatcctc
atcctgctctacgctatgtacaagtaccgcaaccgcgacgaggggtcctaccaggtggac
cagagccgcaactacatcagtaactcagccacgcagagcaacggagcgctggtgaaggag
aaacagcccagcactgccaagacggtcaccaagaacaagaagaacaaagacaaagagtac
tacgtctga
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