Pseudochaenichthys georgianus (South Georgia icefish): 117463439
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Entry
117463439 CDS
T09629
Symbol
sstr1b
Name
(RefSeq) somatostatin receptor type 1
KO
K04217
somatostatin receptor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117463439 (sstr1b)
04081 Hormone signaling
117463439 (sstr1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pgeo04030
]
117463439 (sstr1b)
G protein-coupled receptors [BR:
pgeo04030
]
Rhodopsin family
Peptide
Somatostatin
117463439 (sstr1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
V1R
DUF2633
Motif
Other DBs
NCBI-GeneID:
117463439
NCBI-ProteinID:
XP_033961567
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All DBs
Position
18:20715607..20719240
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AA seq
368 aa
AA seq
DB search
MDFNGSQDYGSYPTGLPFNTSMDYEDYYQEPDASKIIIPSIYALVCCVGLTGNAMVIYVI
LKYAKMKTATNIYILNLAIADELFMLSVPFLATSAAVRHWPFGSLMCRLVLSVDGINMFT
SIFCLTVLSVDRYIAVVHPIKAARYRRPTVAKVVNVCVWGLSLIVILPIIIFADTVPAQD
GGVDCNFLWPESAWSEAFVVYTFLLGFLLPVGAICLCYCLMVARMRAVGLKAGWLQRRRS
EKKITRMVLLVVAVFVICWMPFYIVQLVSVFHRPPDPMVTQLFVILSYVNSGANPILYGF
VSDNFRRSFQRIVCFRWLESGLDAEQVDYCAVALKRQTACNPLDFPKDCMASDMVFRNGT
YTSRTTTV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaatgggagccaggactatgggtcctatccaacagggctgccctttaacaca
agcatggactatgaggactactaccaggagcctgatgccagtaaaatcataattccatcc
atctatgctcttgtctgctgcgtcggtcttactggcaatgccatggtcatctacgtcatt
ctgaaatatgccaaaatgaaaacagctactaacatttatatcctcaacttggctattgct
gacgagttgttcatgttgagtgttccttttctggccacatcggctgctgtccgccattgg
cccttcggttcgctgatgtgtagattggtgctgagcgtagatggaatcaatatgtttaca
tcaatcttctgtctgactgtgttgagtgtggaccgttacatagcagtggtccaccctata
aaggcggcccgctaccgcagacccactgtggccaaagtggtgaatgtgtgtgtatggggg
ctgtcactgatagtcatcctgcccatcattatcttcgcagacacggtcccagcacaggat
ggtggggtggactgtaacttcttgtggcctgaatctgcatggtcagaagcatttgtggtc
tacaccttcctgttggggtttttactgccggtcggggccatttgcctctgctactgtttg
atggtggccaggatgcgagcagttgggctaaaagcaggctggcttcaacggcggcgctcg
gagaagaagatcacccgaatggtgctgctggtcgtggctgtgttcgttatctgctggatg
cccttctacatcgtccaattggtcagcgttttccacaggcccccagaccccatggtgact
cagctgttcgtcatcctcagctacgttaacagcggcgccaatcctatcctgtacggcttt
gtttccgacaatttccggcgctccttccagcgcattgtgtgtttccgctggctggagtct
gggctggatgcggaacaagtggattactgtgctgtggctttgaagagacaaacagcatgt
aaccctctggatttccccaaggactgtatggcttctgatatggtgtttcgcaatgggaca
tatacctcccgtacaaccacagtgtaa
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