Pseudochaenichthys georgianus (South Georgia icefish): 117463482
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Entry
117463482 CDS
T09629
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117463482 (dennd4c)
Membrane trafficking [BR:
pgeo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117463482 (dennd4c)
BRITE hierarchy
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR
PPR_long
PPR_3
Motif
Other DBs
NCBI-GeneID:
117463482
NCBI-ProteinID:
XP_033961614
EnsemblRapid:
ENSPGEG00000005195
LinkDB
All DBs
Position
18:16399897..16429274
Genome browser
AA seq
1912 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPISDLAVINRSAGETVPEGFT
CIDSTYSGQPANLNHGSLKSPELFLCYKRGRGKSPLIDIGVLYEGKERLIHGCEVIQATP
YGRCANVNNSSATSQRIFITLRRAPPVTPQNSLAVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSNVFLCYKKSVSASNSISYKAGLIFRYPEEDYESFPLSESVPLFCLPMGATIEC
WAPNTRDPLPVFSTFVLTISSGEKVYGSAIQFYEPHPVDQLSEKQKIQLGLLTTVEKKMI
PNRPVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHHLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPLSGADYGTLLMNLGSENCATLLHFILLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLVNSLSNLHHQLATVTVGQTPQDNSAV
DMTPIEADFTWHKKKTALEMEIQENFLRFMASILKGYRSYLKPITQAPSVKATSADSLYD
LQGFLKSRDRTHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITD
KGAKVEGESSEDTRLLELDESQKSEHTVFVMPAEPPAHDGTEPSPRYTYKSFPRLQIELF
DCPMEIRPSISSSAAGASLSSSPALLAKRTKQEIKLAYKMAKHFYSNPPRWARCLFSHCY
SLWFICLPAAVRLSKSKSRAMQQAYNVLLKMRTTEVEVLDEVCYRVMMQLCGIWGLPVMA
VRVLVEMKKAGVHPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNVVRGVAQFKKALD
PKSANKGPSATATSLGVSAVNDADRLSHGSADSSSEVNSEEHNRLAHGTEDTTDKHCSTG
RQSDQGYGSKDDMHQELAESLRVSTEQTNNSKAQRNGGDIAGSVDSAIAVAEPPSPVDVP
SPVPSIVKLSTGSFDSGRETGTGKLFRRRSKNDNVSLPDDEASLPAGDAANQPQQQRQKS
FGERSCSFSVETRAGMLLEQGVDHMASQMGADARILAAVLSACPSPPPNSLSKSLFKDLK
EEPEEDQVVMKLPEEEGQEEEKGDDEEMEGAELKLETRERKHTETNEEDPGLRGATLDRA
DVQVGADPLSLLVTEVEESASVTSQEPPRSVPAVVSRNLAEEIEMYMSLRSPLGPKSSSM
ELQQAQGDSTDSPQPKQALERRSSLPVPPVKTPTGSPGDTPKRSPNTVTRSKTFAVKTKT
PGSAVGSPRSASLTALVKSAQGGSLGSVINSISGIKMDNLLTGPKIDVLKSSMKQAANVA
SKVWGAVASAYSYSDDEDEQAQGGGGFPSHLDEQMLAAHDVDDSPERGAIPGLVANGLNQ
SCTSLGSSSGSSDTGRGTHLTYQTPGRARVPDSEQGSSLHASSSSIYQNCALEVLMSSCS
QCRSCEALVYDEEIMAGWTADDSNLNTNCPFCSTAFLPLLHVEFHDLRTMTGFYMNPSAS
GDSIHSGSAQPTASSAADIKAPDLLSFPEEEARETPDNQPGTLKSLVPEPVQSDPLGLLE
HQAAGKQRRCSGTSLTRSNSVGGPLQSLDYSPRPGHGVSTTSLPCSLQEVSDGMGTKRPN
PKPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLPTHLP
GLILTSEHCNKGVQLPLTSLSQDSKQVYVQLLWDNINLHQDHGEPLYQLWRTLLEKKGTL
APTDHQEIRTLLNTIVRSIQTNDVYGPINLLIREIKRRPEGFKRQRSIYREIMFLSLVAL
GKENIDVEAFDREYRLAYDELSEEQLKSLHIIDQPPSPNVQWCLKCFGAPVI
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggataagggtcaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgcctctggagcaggacctctccgagaccaagtccagcgggcccaaagccccc
atcagcgacctggccgtcatcaaccggtccgccggagagacggttcctgaaggcttcaca
tgcatcgacagcacctacagcggccagcccgccaacctcaaccacggcagcctgaagagc
cccgagctgttcctgtgctacaagaggggccgggggaagtccccgctcatcgacatcgga
gtgctgtatgagggtaaggagcgtctgatccatggctgcgaggtgatccaggccacgccg
tacggccgctgcgccaacgtcaacaacagctcggcaacatcgcagcgcatcttcatcacg
ctgcgccgcgcgccgcccgtcacgccgcagaactccctcgcagtgaccgacatctgcgtc
atcgtcacgagcaaaggagagacgccgcctcacaccttctgcaaagtggacaagaacctc
aactgtggcatgtggggctccaatgtgttcctgtgttacaagaagtcagtgtctgcgtcc
aattccatcagttacaaagctggtctcattttccgttacccagaagaggactatgagtcg
ttccctctgtcagaatctgtccctctgttctgtttgcccatgggtgcaacaatcgagtgc
tgggcgccaaacacacgagatcctctccccgtcttctccacatttgtcttaaccatctct
tccggggaaaaggtgtatgggtcagccatccagttctacgagcctcatcccgtggatcag
ctgagcgagaagcagaagatccagctgggcttgctcaccacggtggagaagaagatgatc
cctaaccgacccgtaaacaccaacaaatgcatttgcctgctctcccgctggcccttcttc
gagtccttccgcaagttcctgatgttcctctacaagctctccgtctccggcccgcaccat
ctgcccatcgaaaagcacatctcccactttatgcacaacgtgtcgtttccttcccctcaa
aggcccagaatattagtccagctgtcggcacatgacaccttgatcctgtcccagcctgtg
tgtacacccctacccctcagcggggcagattacggcactctgctgatgaatctgggctcg
gagaactgtgccacgctgctgcacttcatcctgctggagagtaagatcctgctgcactcg
ctgcggcccgccgtgctcaccggggtggccgaggctgtggtggctatgatcttccccttc
cagtggcagtgtccctacatccctctgtgcccgctctccctcgccggagtcctcaacgct
ccgtgtccattcatagtgggcgtggactcccgctacttcgacctttacgaccccccgcca
gatgtcgtctgtgtagatctggacaccaacaccatctacctgtctgatgaaaagagacac
agcaactggaagaacctcccaaagaaaccctgcaagagtctggttaactccctgagcaac
ttgcaccaccagctggccacagtgacagtgggtcagacaccacaggataactcggcggtg
gacatgactcccatcgaggcggacttcacctggcacaagaagaagacggcgctggagatg
gagatccaggagaacttcctgcgcttcatggcgtccatcttgaagggctaccgctcctac
ctcaaacccatcacacaggcgccttctgtaaaagccacgtctgcagactccctctacgac
ctgcaaggatttctcaaaagtagagaccgcacccaccagaagttctactcccagctcacc
aagacgcagatcttcatccgcttcatcgaggagtgcaccttcgtcagcgacaaggacacc
ggcctcgccttttttgacgactgcgtggagaagcttttcccctctgataaaatcaccgac
aagggcgctaaggtcgaaggagagtcatctgaggacaccagactgctggagctggacgag
tctcagaagagtgaacacactgtctttgtaatgccggcggagcctccagctcacgatgga
actgaaccctcccccagatacacatataaaagtttccccaggctgcagatagagctgttc
gactgtcctatggagatacggccctccatcagcagcagtgcggcgggggccagtctgtcc
agcagccccgccctgctggctaagaggaccaagcaggagatcaagctggcgtacaagatg
gcgaagcacttctactccaaccccccgcggtgggcgcgctgtctcttcagtcactgctac
agcctgtggttcatctgcctgcccgctgccgtcagactgtccaagtccaagagccgcgcc
atgcagcaggcctacaacgtcctcctgaagatgaggaccaccgaggtggaggtgctggac
gaggtgtgttacagagtgatgatgcagctctgcggtatttggggtcttcccgtcatggct
gtgcgggtcctggtggagatgaagaaagctggagtacatccgaacgccatcacttatgga
tactacaacaaggccgtcttagagagcccgtggccgagcagaaaccgaagcggcctcttc
atgtggaccaagcttcgtaatgttgttcgtggagtggcccagttcaagaaagctctcgac
ccaaaatctgccaataagggacccagtgctacagctacatctctaggtgtgtcagcggtc
aatgacgcggaccgtttgagtcatggaagtgccgacagctcgagtgaggtcaacagtgaa
gagcacaaccgcttagcccacggcacggaagacacaacagacaaacactgtagtacagga
aggcagtctgatcaaggctacggctccaaggatgatatgcaccaggagctggccgagtcc
ttacgagtctccactgaacagacaaacaactccaaagcacagcgcaatggaggtgacatt
gccggctcagtggacagtgcaatcgcagtagcagagccccccagtcctgtggatgtgccc
tcgcctgtccccagtattgtgaagctttccacagggagctttgacagtggcagggaaaca
ggcacagggaagctgttcaggagacgcagcaagaacgataatgtgtctctccctgacgac
gaggcctcgctgcctgctggagacgcagctaaccagcctcagcagcagcggcagaaatcc
ttcggcgagcgcagctgcagcttcagcgttgaaacgcgcgctggcatgctgctggagcaa
ggcgtggaccacatggctagccagatgggcgccgacgctcgcatcctggctgcggtgctg
tctgcatgccccagtccgccccctaattctttgtccaaatcactttttaaagacttgaag
gaagagcctgaagaagatcaggtggtgatgaagctgccagaggaagaggggcaggaagag
gagaaaggagatgatgaagagatggagggggcggagttaaaactggagacacgggagagg
aagcacacggagacaaacgaggaggaccccgggctgcgaggggccaccctggacagggcc
gacgtgcaggtgggcgccgacccgctttccctccttgtgacggaggtggaagagtcggcc
tccgtcaccagccaggagcccccccgctccgtgcccgccgtggtgtcccgcaacctggcc
gaggagatcgagatgtacatgagcctgaggagccccctgggccccaagtcctccagcatg
gagctccagcaggcgcagggggactccaccgactccccccagcccaagcaggctctggag
cgcaggtccagcctccccgtgcctcccgtcaaaactcccaccggctccccaggcgacacc
cccaaacgcagccccaacactgtgacccgctccaagactttcgcagtgaagacgaagacc
cccggcagcgcggtgggtagcccccgatcagcctcactgacggcactcgtcaagtccgcc
caggggggctcgttgggctccgtcatcaactccatatcaggtatcaagatggacaacctg
ctcaccggacctaaaatcgacgtgttgaagtccagcatgaaacaggcggcaaatgtggcc
agcaaagtgtggggggccgtcgcttcagcttactcctactcagacgacgaggatgaacag
gctcagggcggcgggggcttcccctctcacctggatgaacagatgcttgctgcacatgat
gtggatgacagtcctgagagaggggccatcccggggctggtggccaacggcctcaaccag
agctgcaccagcctgggcagcagcagcggcagcagcgacacgggccgcgggacacacctg
acatatcaaactccaggacgagctcgggttccagactctgagcagggctcctcgcttcac
gcttcctcctccagcatctaccagaactgtgcactggaggtgctgatgtccagctgctcg
cagtgtcgctcctgtgaagcgctggtgtacgacgaggagatcatggcgggttggacggcc
gatgactccaacctgaacaccaactgtcccttctgcagcacggccttccttcccttactg
catgtggagtttcatgacttgcgcacaatgacagggttctacatgaatcccagtgcttca
ggagacagtatccacagcggcagcgctcagcccacagccagcagcgccgccgatataaag
gcaccagacctcctctctttccctgaagaggaagctcgagagactccggataatcagcct
ggaacacttaagagtctggttcctgagccggtgcagtcggaccccttaggtctcctggag
caccaggcggcggggaagcagcgcagatgcagcgggacgtctctgacacgcagcaacagt
gttgggggtccgctgcagagcctggactactccccgagacccggacacggcgtctccacc
accagcctgccctgcagcctgcaggaggtgtcggatggcatggggactaaacgcccgaac
cccaagcccgtgtccgtcccgtacctgagccccttggtgctgcgcaaagagctggagacg
ctgcttgagaacgagggagaccaggtgatctacacccacaagttcctcagccagcacccc
atcatcttctggaacctggtttggtatttccgtcgtttggacctgcccactcacctccct
ggactcatcctgacctctgaacactgcaacaaaggagtgcagctgcccttgacatcactg
tcccaggacagtaaacaggtttacgtccagctcctgtgggacaacatcaacctgcaccag
gaccacggggagcccctctaccagctctggaggacccttttggagaagaaggggacgctg
gcccccacagaccaccaggagattcgtaccctcctcaacacaattgttcgtagcattcag
accaacgacgtgtacgggccgatcaacctgctgatccgggagatcaaacggcgcccagag
ggattcaaacggcagaggagtatctatagagaaataatgttcctctcactggtggctttg
gggaaggagaacatcgacgtggaggccttcgacagagagtaccgcctggcgtacgatgaa
ctgagcgaggagcagctcaagtctctgcacataatcgaccaaccgcccagccccaacgtc
cagtggtgcctcaaatgcttcggagcccccgtcatctga
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