Pseudochaenichthys georgianus (South Georgia icefish): 117463557
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Entry
117463557 CDS
T09629
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117463557 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117463557 (dhx15)
03009 Ribosome biogenesis [BR:
pgeo03009
]
117463557 (dhx15)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117463557 (dhx15)
Spliceosome [BR:
pgeo03041
]
Complex A
U2 snRNP components
U2 related factors
117463557 (dhx15)
Complex B
117463557 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117463557 (dhx15)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
90S particles
Helicases
117463557 (dhx15)
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
Flavi_DEAD
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117463557
NCBI-ProteinID:
XP_033961760
EnsemblRapid:
ENSPGEG00000005505
LinkDB
All DBs
Position
18:16996520..17027246
Genome browser
AA seq
748 aa
AA seq
DB search
MSRRQRVDLGDDYSPGKKRPSDRRDRDRERDDRPRDRDRDVKPSSVPRSVASSGSGGFLK
QPSLQQQTNPYTNLPHTPRYYDILKKRLQLPVWEYRERFTDILMQNQCFVLVGETGSGKT
TQIPQWCGDMVLAVDGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYAIRFEDCS
SAKTVLKYMTDGRLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLK
VIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEV
DEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPAQQQRIFEPPPPT
KPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQ
QRAGRAGRTCPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDF
MDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCEYNCSNEI
LSITAMLSVPQCFVRPTEARKMADESKMRFAHIDGDHMTQLNVYHAFKQNSDSNQWCYEN
FVNYRSLMSADNVRQQLARIMDRFSLPRRSTEFTHRDYYTNIRRALITGFFMQVAHLERT
GHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTSKNYIRTCTDVKPEWLVKIAPQYYE
MSNFPQCEAKRQLERLIAKASSKEYTQY
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacgacagcgtgtagatttgggtgatgattattctccgggtaaaaagagaccc
tcggataggcgtgaccgcgacagagagcgcgatgaccggcccagggatcgggacagagac
gtgaagccctccagcgtgccccgcagcgtggcttcgtctggcagtgggggtttcctcaaa
cagccctccctccagcagcagaccaacccctacaccaacctgccccacacgcctcgctac
tacgacatcctgaagaagcgcctgcagctgcctgtgtgggagtacagagagcgcttcacc
gacatcctcatgcagaaccagtgctttgtgctggtcggggagacgggatctgggaaaacc
acacagatccctcagtggtgtggggacatggtgctggcagtggacggtccgaagagagcg
gtggcctgcacccagcctcgcagggtcgccgccatgagcgtcgcccagagagtcgccgat
gagatggatgtgatgctgggccaagaggtgggctacgccatccggtttgaggactgcagc
tctgccaagacagtgctcaagtacatgacagatggaaggctgctgcgggaggccatgaac
gatcccctgctcgagcgctacggtgtcatcatcctggatgaggctcacgagcgcacgtta
gccacagatatcctcatgggggtcctcaaggaggtcgtccgccagagggctgacctcaag
gtcatcgtcatgagtgccacgctcgacgccggaaagttccaggtgtactttgacaactgt
ccactgctgaccatccccggacgcacccaccccgtggagatcttctacacccccgaaccg
gagcgggactacctggaggcggccatccgaaccgtggtccagatccacatgtgcgaggtg
gacgaaggcgacctgctgctcttcctcaccggacaagaggaaattgacgaagcctgcaag
cggatcaagagggaggtggacgacctggggcctgaagtcggggacatcaagatcatcccg
ctgtactccaccctgcccccagcgcagcagcagaggatctttgagccacccccacccacc
aaaccaagcggtgccatcggaaggaaggtcgtggtgtccacaaacatcgctgagacgtcc
ctgaccatcgacggcgtggtgtttgtaattgatcctggatttgccaagcaaaaggtgtat
aacccccgtatcagagtggagtcccttttggtgacagccatcagtaaggcgtcggcccag
cagagggcgggccgtgccggacgtacatgcccaggaaagtgtttccgcctttacacagag
aaagcttacaagacagaaatgcaggacaacacgtatccagagatcctgaggtctaacctg
ggctctgtggtgctgcagctgaagaaactggggatcgacgacctggtgcactttgacttc
atggaccctccagctccagagaccctgatgcgcgccctggagctgctgaactacctggcg
gcgctgaatgacgacggtgacctgacagagctgggctccatgatggccgagttccccctg
gacccccagctggccaagatggtgatcgccagctgtgaatacaactgctccaacgagatc
ctctccatcaccgccatgttgtcagtcccacagtgcttcgtccgacccacggaggctaga
aagatggccgacgagtccaagatgcgcttcgcccacatcgacggagaccacatgacgcag
ctcaacgtgtaccacgccttcaaacagaacagcgactccaaccagtggtgctacgagaac
ttcgtgaactaccgctcgctgatgtctgcggacaacgtgcggcagcagctggcgcggatc
atggaccgcttcagcctgccgcggcgcagcaccgagttcacccacagagactactacacc
aacatccgccgcgcactcatcaccggcttcttcatgcaggtggctcacctggagcgcacc
ggacactacctgacggtgaaggacaaccaggtggtgcagctgcacccgtccaccgtgctg
gaccacaagccggagtgggtgctctacaacgagttcgtgctcacctccaagaactacatc
cgcacgtgcaccgacgtcaaaccagagtggctggtgaaaatcgccccgcagtactatgag
atgagtaacttcccccagtgtgaagctaagagacagttggagcgtctcattgccaaagcc
tcatccaaggagtacactcagtactga
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integrated database retrieval system
