Pseudochaenichthys georgianus (South Georgia icefish): 117463606
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Entry
117463606 CDS
T09629
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04814
Motor proteins
pgeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117463606
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117463606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117463606
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117463606
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117463606
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117463606
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
117463606
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
117463606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
DUF4172
Motif
Other DBs
NCBI-GeneID:
117463606
NCBI-ProteinID:
XP_033961819
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All DBs
Position
18:14484521..14505088
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AA seq
1282 aa
AA seq
DB search
MSSTGTVESSRPPKIGSIVEVTGKGQRGTVAYIGATLFASGKWVGVILDEAKGKNDGTVQ
GKRYFTCEENHGIFVRQSQLQVMDDGSGATSPETPESGIARTLRQKDIPETPRSKQIPVN
IKKSSSRRSAKWSTPGRLTPATSLPSLLIRPSIRSNLPLMASRESLSTSLSGDVSEAAHP
SHPAALGAPVMPQPSGSTAASAAAGPATPSKRMLSFSDQVEPVISKQEEESMRAQVKDLE
EKLETLKMKRTEDKAKLKELEKHKIQLEQLQEWKNKMQEQQADLQKQLKEAKKDAREAQE
SKDHYMEEMSDTADAIEMATLDKEMAEERSESLQVEVDTLKEKVEELSMDLEILRHEISE
KGSDGAASSYHVKQLEEQNSRLKEALVRMRDLSTSEKQEHLKLQKQMEKKNTELETLRTQ
KEKLQEDVKQAEATVDELKEQVDAALGSEEMVETLTERNLDLEEKVRELRETVTDLEAIN
EMNDELQENGRETEMELREHVDLSGAKVREAEKKVEAAQETVADYQQTINKYRDLTTSLQ
DANRELISQQNANAEQVQQPPAELFDFKIKFAETKAYAKAIEMELRKMEVAQSNRQVSLL
TSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEKFDLNGNLPQGQGLRGPPGD
QCSFASGLVYSLSLLQATLHKYEQALNTCSVEVFKRMGTLYSEMSFHERSLDYFIDLLHK
DQLDETVQVEPLTKAIKYYQQLYSVHLADHTEDCTVQLADHIKFTQSVLDCMGVEVARLR
AFLTAGQEGSNFAVLLKDLDTSCSDIKQFCKKIRRRMPGTDVAGVPVALNFGPQVSELLT
ECRRQHTRVVAVLQEVAAAGAQMVAQVAEQEGLSALKLEDIACKALEQVYGSHGLNGTEC
LRQSCSTVITSMNKMATAMQEGEYDADKPQGQTLPVEARAATVRAEMTDAEGLGVKLEDR
ETVIKEVKKSLKIKGEELSEASVRLSLLEKKLDTSTKDADERVEKIQTKLDENLALLKKK
EKEFEETMDALQADIDQLEAEKAELKQRITSQSKMTIEGLRAPAASGIANIVQGSAGGLP
PSMAGSVQVVDSPLLRQQVEVQRLGIRHLKNENNSLKAEKMRAQLASLPPLCPAKLPQAS
KDSSMPPEGLNTGIYRRTDQLLATLLKLSSEVKVVDITGKTAVSAGAQMMEQTARLQNLS
NALDKLKGEVAEHVISHNPGAKASSDFATFPVSSFVKAKEEKQGGTVFVGRVAIPCTRGQ
EQVHRLVLSQQQLHKVHRLLMT
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacaggaacggtggagagtagtaggcctccaaagattggctctatagtggag
gtgacggggaagggtcagcgtggtaccgttgcttatatcggagccaccctctttgcctct
gggaaatgggtgggtgtcatactggatgaggccaaaggcaagaatgatggcactgtgcag
gggaaacgctacttcacctgtgaggaaaaccacgggatatttgtcagacagtcccagctc
caggtgatggatgacggctctggggccacctcaccagagactcctgaatcaggcattgca
aggacactgagacagaaagacattccagagactcccagatccaagcagatacctgtgaac
attaagaagtcctcttcccgacgctctgccaagtggagcaccccaggccgtctaaccccc
gccacctccctcccctccctcttgatccgtccctccatccgctccaacctgccgctcatg
gcgtctcgtgagagcctgtccacctctctgtctggagatgtcagtgaggcggcccacccc
tcccatccggccgccctgggggctcctgtcatgcctcagcccagcgggtcaactgcagca
tcagcagctgcgggtccagctactccaagcaagagaatgttgtcattctctgaccaggtg
gaacctgtcatttccaagcaggaggaggaatcaatgcgtgctcaggtcaaggacctggag
gagaagctggaaaccctcaagatgaagcggacggaggacaaagccaagctgaaggagctc
gagaaacacaagatccagctggagcagcttcaggagtggaagaacaaaatgcaggagcag
caggctgacctgcagaaacagctcaaagaagctaagaaggatgcccgggaggcacaggag
tccaaggaccactacatggaggagatgtcagacacggctgacgccatagagatggcaaca
ctggacaaagagatggctgaagagcggtcagagtcgctgcaagtggaggtggacacgctg
aaggaaaaggtggaggagctctccatggacctggagatccttagacatgagatttcagag
aaagggtcagatggagctgcctcgagttaccatgtcaaacagctggaggagcagaatagc
agactgaaggaggcattggttcggatgcgggacctgtctacttcagagaagcaagagcat
ctgaagctgcagaagcagatggagaagaagaacactgagctggagactcttaggactcag
aaggaaaagctgcaggaagatgtgaagcaggcggaggctacagtcgacgaattgaaggag
caggtggatgctgctctggggtcagaggagatggtggagaccctgacggagaggaacctc
gacctggaggagaaagtcagagagctgagagaaaccgtcactgatttggaggccatcaac
gagatgaacgatgagctccaggagaacggccgggagacggaaatggagctgagggagcat
gtggatctgagcggagcaaaggtcagagaggctgaaaaaaaggtggaggctgcccaggag
actgtagctgattaccagcagaccatcaacaaataccgagatctgaccaccagcctacag
gatgccaacagagagctgatcagccagcagaatgcaaatgctgaacaagttcaacaaccg
cctgctgaactgtttgacttcaagattaagtttgcagagaccaaggcctatgctaaggcc
attgagatggagctgaggaaaatggaggtggctcagtcaaacagacaggtgtccctcctc
acctccttcatgccagactccttcctccgtcatgggggagatcacgactgtattcttgtc
cttctgctcatcccccggctcatctgcaaggctgagctgatcagtaaacaggcccaggag
aagtttgacctgaacgggaacttgccccagggccaggggctccgggggcctccaggagat
cagtgcagctttgcctcaggactggtctactccctcagcctgctgcaggccactctgcat
aaatatgaacaggctctgaatacctgcagcgtggaggtctttaagcgcatgggtacactc
tactctgaaatgagcttccacgagcgctctctggactatttcatcgacctgctgcataaa
gatcagctggatgagaccgttcaggtggaacctctcaccaaggcaatcaagtactaccag
caactgtacagcgtccatctggcagatcacactgaagactgcacagtgcagctggctgac
cacattaagtttacccagagtgtcctggactgcatgggggtggaggtggctcgtctgcgg
gcgttcctgactgcaggtcaagagggctccaacttcgctgtccttctgaaggacctggac
acttcctgctctgatatcaaacagttctgcaagaagatccgccgtcgcatgcccgggaca
gatgttgctggagtacctgttgctctcaattttggaccacaggtgtcggagttgctgacg
gagtgcaggcgccagcacacccgtgtggtggctgtgctgcaggaggtggctgcagctgga
gctcagatggtggctcaggtggcagaacaggaggggctcagcgctctcaaactggaggat
atcgcctgcaaggctctggagcaggtgtatggctctcatggcctgaacggcacagagtgt
ctgcgtcagtcctgcagcaccgtcatcacctccatgaacaagatggctacggccatgcag
gagggggagtacgatgctgacaaaccacagggccagactctcccagtggaagcaagagca
gccactgtcagggctgagatgactgacgctgaaggtctaggagtgaaactagaagacaga
gagacggtcatcaaggaagtcaaaaagtccctcaagatcaagggtgaggagctgagtgag
gcaagtgtccgtctgagcctgctggagaagaagctggatacctccactaaagacgcagat
gaacgggtggagaagattcagaccaaactggacgagaaccttgccctgctgaagaagaaa
gaaaaggagtttgaggaaaccatggatgccctgcaggctgacatcgaccagctggaggcg
gagaaggcggagctgaagcaacgtattacaagccaatcgaagatgaccatcgaaggcctg
agagccccagctgcctctggaattgccaacattgttcagggatctgcaggaggtctgcct
ccatccatggcaggatcggtgcaggtggtggactctcctctgctccggcagcaggtggaa
gttcagaggttgggaatcaggcacctcaagaatgaaaacaacagcctcaaggcggagaag
atgagagcccagctggcctccctgcctcccctctgccctgccaaactaccacaagcttcc
aaagatagctccatgccaccagagggactgaacacaggtatctaccgcaggaccgaccaa
ctgctggcaacccttctgaagctgagttcagaggtgaaggtggtggacatcaccgggaag
acagcagtgagtgccggtgcccagatgatggagcagacggctcgactgcagaacctcagt
aacgctctggacaaactcaaaggagaagtagctgaacatgtcatctcccataaccctgga
gctaaggcttcctccgactttgccaccttccccgtctcctcctttgtgaaggccaaggaa
gagaagcaggggggaacagtgtttgtagggcgtgttgccatcccatgcacccgcggacag
gaacaagtgcaccgcctcgtcctgtcccagcagcagctgcacaaagtgcaccgcctcctc
atgacctaa
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