Pseudochaenichthys georgianus (South Georgia icefish): 117463627
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Entry
117463627 CDS
T09629
Symbol
samd1b
Name
(RefSeq) sterile alpha motif domain-containing protein 1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117463627 (samd1b)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
117463627 (samd1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_PNT
SAM_2
DUF4777
Motif
Other DBs
NCBI-GeneID:
117463627
NCBI-ProteinID:
XP_033961899
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All DBs
Position
1:18475129..18488922
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AA seq
632 aa
AA seq
DB search
MSEPNKYREWILETIDSLRLRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFTAAGSSSSGAEAARERTKHHHPNNNSAHSFTDQEE
EEEDSEPSPGPLTQTSATDKKPKPASSPSSGNGFQSCGATSGCAVGSGSEEEKASAPRDE
GLGQQGVGDCNITHAHDDGGGDASGITPSKADAVRGENERCLSRDDTQNKTSSGSVGDHP
QQQRETAPLKPKLEVGGGGGTITAGNHANSDLGDRLVASVRRLSEKSIRGDSTSATRGHM
QPLGLKEILGYLSSQERLSEEKLTRGKVKVVMEREVARGRLRRTRYGNITLPLRGVVTED
PSTADRLVKSALQDTVTKPPSPSPRENEAMETASEEEEEEEDPRSSDEEEGLSPVAMTTD
PELIEKTSEDAPEIQAASKQESSPQQHGGKGMGGIDSLTRMELPPVQGASLCSCNSAHLE
ERAVRPDQLQKEAHDDTTNHTSSGFNSLECKTEVGMSSCLLTPTASPRDSGVCEERGMNG
GLGGGGGFIKSEGTIGSPMDWTVSDVVSYFTEAGFPEQAAAFGTQEIDGKSLLLMQRNDV
LTGLSIRLGPALKIYERHVKVLQKTHFDEEDC
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaataagtaccgagagtggatcctggaaacaatcgactctctccgcttg
aggaaagcccgtcccgatctggagaggatttgtcgaatggtccgaagacgacacgggtca
gacccggaccgaaccaggacagaactggagaaactgatacaagagcagaccgtgctcaaa
gttagctacaagggctccatatcgtaccggaatgcggcgaaggtgcagaggaaaagccga
aagaagagtgagtttacggccgctggcagcagcagcagcggcgcggaggcagcgagggag
cggaccaaacaccaccatccgaacaacaacagtgctcacagcttcaccgaccaggaggag
gaagaggaggactcggagcccagcccaggtcccctcactcaaacatcagccaccgacaag
aaacccaagcctgcctccagcccgagtagcggaaacgggttccagagctgtggcgcaaca
tcgggctgcgctgtcgggagcggcagtgaagaggagaaagcaagtgctcctagagacgag
ggattaggacagcagggagtgggggactgtaacataacacacgcacacgacgacggcggt
ggcgatgccagcgggataacgccgagcaaagccgatgcagttcggggagaaaatgagcgg
tgtttgtcccgagatgacacccagaacaaaacttcctccgggagcgtcggggaccacccg
cagcaacagagagagactgcgcccctcaagcccaaacttgaagtcggaggaggagggggc
accataacagcggggaaccacgccaactcagacctgggcgacagactggtggcttctgtt
cgccgcctgtccgaaaagagcatccgaggggactctaccagcgccaccagaggccacatg
cagccgctcgggctgaaggagatcctgggctacctgagcagccaagagcggctgtcggag
gagaagctgacccgaggcaaagtcaaagtggtcatggagagagaggtggcgaggggccgg
ctacgcaggacccgctacgggaacatcactttgccgctgaggggggtggtgacggaggac
ccgagtaccgcggacagacttgtgaagagcgcactgcaggacacggtgacaaagccgccg
tccccctctcccagggagaatgaggcgatggaaacagccagtgaagaagaggaggaggag
gaggatccccggagctcagacgaggaggaaggtctatcccctgtagccatgacaaccgat
ccggagctcattgagaaaacctcagaagatgctccagagatccaggcggcatcaaagcag
gagagctccccgcagcagcacgggggtaaagggatgggtgggattgattccctcaccagg
atggagcttccacctgttcaaggagcttcactgtgctcatgtaacagcgcacacttagag
gagagagctgtccgtcctgatcagctacagaaggaggcacatgatgacacaaccaaccac
acctcctcaggctttaacagcctggagtgtaagacagaggttggcatgtcgtcctgcctg
cttacacccactgcctccccgagagactccggcgtgtgtgaggagcgagggatgaacgga
ggacttggcggtggaggagggtttataaagtccgaggggaccattgggagccctatggac
tggacagtgtctgatgtggtcagttatttcacagaagcaggtttccctgagcaggcggct
gcattcgggacccaggaaatcgatggcaagtctcttctcctgatgcagcgtaacgatgtt
ttgaccggcctgtcgatcagactcggccccgccctcaagatctacgagcgccatgtaaag
gttctgcagaaaacacactttgatgaggaggactgttaa
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