Pseudochaenichthys georgianus (South Georgia icefish): 117463633
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Entry
117463633 CDS
T09629
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117463633 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117463633 (sec24d)
Membrane trafficking [BR:
pgeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117463633 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
117463633
NCBI-ProteinID:
XP_033961863
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All DBs
Position
18:complement(17635668..17654327)
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AA seq
1119 aa
AA seq
DB search
MSQQGYVAAPPYSQAQPGMGGYQGGFGAGPAQPLYGHYGGPPQTFNGPPTGMMKAPVSSA
AGMPPPAAPSQYNPNVQQNGAHPQRYPPPAAPASYGQPLQSQYNNMAPAAPPPAQQLTNQ
MSTMNLGSYASGPMQSPPPPTNSVAQQPFQPAPPPAMGQPMMPPGPQSPHMSPHMSPHMS
PHMSAPQSPQANMPMAGPPMAGPPMAAPPMGGPPMSGMGRPFPGPLPPGPGGFQQPGPGP
AGPTGYPQQAGQFGGNMAGPQPGMMGPQPGMMGPQPGMMGPQPGMMGPQPGMMGPQPGMM
GPQPGMMGPQPGMMGPQPGMMGPQPGMMGPQPGSAGGLAGPPQKKLDPDSIPSTTQVIED
DQAKRGGQVYITNIRGQVPPLVTTEFPIQDQGNASPRFIRCTTYSLPCTADLAKQCQVPL
AAIIKPFASVPKNETPLYVVNHGETGPIRCNRCKAYMCPYMQFIDGGRRFQCGFCNCVNE
VPAFYFQHLDHMGRRVDFYERPELSLGSYEFAATLDYCKNNKVQNPPAYLFMIDVSYNNV
KSGLVKLICDELKTLLDNLPCEDGSESSAIKVGFVTYNKVLHFYNVKSALAQPQMMVVSD
TAEMFVPLLDGFLVNYQDSRAVIYNLLDQIPDMFADSNESETVFVPVIQAGVEAFKAAEC
SGKLFIFHSSMPTAEAPGKLKNRDDKKLVNTDKEKTLFQPQKGVYEQLSKECVAQGCCVD
LFLFPSQYVDVATMADVPSHTGGSVYKYNNFQVETDGEHFLTDLRKDVQKSIGFDAIMRV
RTSTGFRATEFFGAIHMNNTTDIEMAAVDCDKALTVEFKHDDTLSEETGALMQCALLYTT
VNGQRRLRIHNLSLNCSLQLSELYKSCETDSLINFFAKSACRAILNQPVKNVREILVNQT
AHMLSCYRKNCATPSAASQLILPDAMKVFPVYMNSLMKSAPLVGSTELATDDRAHQRLSI
MAMGVEDTQLLLYPRLTPLHNLDVGSEALPAPVRCSEERLSESGMFLLENGQSMFLWLGL
GSPPDIVQSLFNVPSLAHLQGNMSALPELDNPLSAKVRSIISGLMEKRPNSMKLQIVRQK
DKPEMLFRQFLVEDKSLHGGASYMDFLCYVHREIRLLLT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacagggttatgttgctgcacccccgtactcccaggcccagcccgggatgggg
ggctaccagggtgggttcggagctggtcctgcacagcccctctatgggcactatgggggt
ccgcctcagacattcaacggtccaccaacaggtatgatgaaggcaccagtctcctctgca
gctgggatgcctccacctgcagcgcccagtcagtacaatccaaatgtccagcagaacggc
gcacatccacaaagataccctccaccagctgctcctgcttcttatggacagcctttacag
tcgcagtacaacaacatggcccccgcggccccccctccagctcagcagctcaccaatcag
atgagtaccatgaacctgggcagctatgcctcgggtcctatgcagagccccccccctcca
acaaactctgttgcccagcagcctttccaaccagcaccccctccagcaatgggccagccg
atgatgccaccaggaccacagtccccccacatgtccccccacatgtccccccacatgtcc
ccccacatgtctgctccacagtctccccaagcaaacatgccaatggcaggccccccaatg
gcaggccccccaatggccgcaccaccaatgggaggcccccccatgtcaggcatgggtcga
ccctttcccggcccccttcctccaggccccggaggtttccagcagcctggtcctggacct
gctggtccaactggatacccccagcaagcaggtcagtttgggggaaacatggcagggcct
cagcctggcatgatggggcctcagcctggcatgatggggcctcagcctggcatgatgggg
cctcagcctggtatgatggggcctcagcctggtatgatggggcctcagcctggtatgatg
gggcctcagcctggcatgatggggcctcagcctggcatgatggggcctcagcctggtatg
atggggcctcagcctggtatgatggggcctcagcctggatcagcaggcggactggcagga
ccaccacagaagaaactggaccctgactctatccccagcaccactcaagtcatcgaggat
gaccaagcaaaacgagggggacaggtgtacatcacgaacatcagaggacaggttcccccg
ctggtcaccactgagttccccatacaggaccaaggcaacgccagcccccggttcatccgc
tgcaccacctactccctgccctgcaccgcagacctggccaaacagtgccaagttccgctg
gccgccatcatcaaacctttcgccagtgtgcccaagaatgagactcctctgtatgttgtg
aaccatggtgagaccggcccgatccgctgcaatcgatgcaaagcctacatgtgtccctac
atgcagtttattgacggagggcgtcgcttccagtgtggcttctgcaactgtgtcaatgaa
gtgccagccttctacttccaacatttggaccacatgggcaggagggtagacttctacgag
aggccagagctgtccctgggctcctacgagtttgcagccaccctggactactgcaagaac
aacaaggttcaaaatcctcctgcctacctcttcatgatcgatgtgtcctataacaacgtt
aagagtggactagtgaaactgatatgtgatgagctgaagactctgctggacaatctgcca
tgtgaggacggctcggagagctccgccattaaggtgggcttcgtcacctacaacaaggtg
ctccacttctacaacgtgaagagcgctctggcccagccgcagatgatggtggtgtcggac
acagcggagatgttcgtccccctgctcgacggattcctcgtcaactatcaggactccaga
gccgttatctacaacctcctggatcagatccctgatatgtttgcagactccaacgagagt
gagacagtctttgttcccgtcatccaggccggcgtggaggcatttaaggcagcagagtgc
agcgggaagctcttcatcttccactcctccatgcccaccgccgaggctccgggcaaactg
aagaacagggacgacaagaagctggtgaacaccgacaaagagaaaacgttgttccagcct
cagaaaggagtgtatgagcagctgtcgaaggagtgtgtggcgcagggctgctgtgtggac
ctcttcctcttccccagtcagtacgtggacgtggccaccatggctgacgtgccctcacac
accggaggctccgtctacaagtacaacaacttccaggtggagacggatggggagcatttc
ctgacagacctgaggaaagacgtgcagaagagcatcggctttgacgccatcatgcgtgtt
cgcaccagcacagggttcagagccacagagttcttcggagcgatccacatgaacaacacc
acggacatcgagatggcggcggtggattgtgacaaggctctgaccgtagagttcaaacac
gacgacacactcagcgaggagaccggagcactcatgcagtgtgcattgctgtacaccacc
gtcaacggacaacgacgtctccgcatccacaacctcagtctgaactgcagcttgcaactg
tcagagctgtacaagagctgcgagacagactctctcatcaacttctttgccaaatcagcc
tgccgtgccatactgaaccagccggtgaagaacgtgcgggagatcctggtgaaccagacg
gcccacatgctgtcctgctacaggaagaactgcgccaccccctcagctgccagccagctg
atcctgcctgacgccatgaaggtgttcccggtctacatgaacagcctgatgaagagcgct
cctctggttggcagcacggagctcgccaccgacgaccgcgcccaccagaggctctccatc
atggccatgggggtggaggacacacagctgctgctctacccacgcctcaccccactgcac
aacctggacgtgggcagcgaggctcttcccgctccggtgcgatgctccgaggagcgcctc
tcggaatccggcatgttcctgctggagaacgggcaatccatgttcctgtggctgggcctg
ggcagccctccggacatcgtgcagagcctcttcaacgtgccctccctggcacacctgcag
ggaaacatgagtgctctgccagagctggacaacccgctgtccgcaaaggtccgctccatc
atcagcggcctgatggagaagaggccgaactccatgaagctgcagatcgtgcggcagaag
gacaaaccggagatgttgttccgtcagttcctggtggaggataagagtctgcacggagga
gcctcctacatggacttcctgtgctacgtccaccgagagatcaggctgctgctcacttaa
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