Pseudochaenichthys georgianus (South Georgia icefish): 117463683
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Entry
117463683 CDS
T09629
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117463683
Membrane trafficking [BR:
pgeo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117463683
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
117463683
NCBI-ProteinID:
XP_033961951
LinkDB
All DBs
Position
3:17825213..17905065
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AA seq
1979 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKSAKPKAPITDVAVVIRSMGEETP
PGFTCVEETPTGHSADLNNGGLMVPQIFLCYRRGRDKPPLTDLGVLYEWKERLKPGCQLI
QTTPSGRPANISGNSSQRIYVTYRRAPESQPHSALALTDICIIVPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGSSGEKVYGAAIQFYEPFPQVCLTDVQRSQLGLLSPDPVP
PASSSCTETSTSTTSSPAKAQCSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISCPHAL
PIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLQNLGPE
NAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWQCPYIPLCPLALADVLSAP
CPFIVGVDSRYFDLYDPPPDVSCVDLDTNTIFHNEDKRALTWKILPKKACKNLMNVLSSL
HQQLVDGQQRPDGLLELSMNDLTELSCGKSLHTLELEIQEAFLRFMAAILKGYRSFLRPI
TQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAF
FDDCVDKLYNSERCADKAGKVDADRPEESRLIEIDESQRSEHTVFITPPELPPLPEGEEH
PLCYRYDGFPVLTLDLFDPVEGLRTPSSRLTAKQSCPTSPAPMFRRTKQEIKTAQKIAKK
YSSIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEVC
YRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWM
KLRNVILGVAQFKQALRRKAAHTQSPLSDGSDLDAVSHGSLDSSADTNLGPFASDSAKVD
PIDDKSSTGDQSDLGYNSLSKEEVRRGDPGAPDSKDDKKESDCSSLSETESAKGSKDCLP
QLDMELHSSFKPRGIVRSSYPYDEASCKPKSSVSAGHVAGLLFSSSLDNIGEVHGNRLLR
KHRSALEEVVGSGSALDWQGGRGRQLSGDTVGSSGTTVLGLGMSQGETDPDKIAGHMGAD
VKILSGAKFSQRKRPRSLALGGIEGAAASRSLDHGEEEEEAEGQDSSDEDRGNTEAIFDL
EDLDLDKPATGAGISSHKCNKKPVRRSVSYGGVSSMTTRGTVKRTDIQMGYDPLSLLVAE
TQSEEQCEDRYPEGDEDSTPSARRHLAREIELYMNHMGSPLSSRTPSMDLQDSASPLLLH
PSSLSAPRRTSLPHSSPLRAAGMPRSCTFHPPSPSQSVSRQRLLSSPSCHSSSTTPSASP
RPSPYRERTDRMSLASPSPSSSSFALDTLITPTLDVFKTSMFSAGKGVAEKASRWYSRLS
TYTTPTKDGHSDRLSISSLGLGDPDCASLLDDEDCDGSLISPQRNGPSGPRRSPRRSPRR
SPLRSTQHSPSAGHSLGRPTSLFPGCVLSPPGFPLPDGSDLGSSRYTSSTSIFNNYAMEL
LISSCSRCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVELRDMRGPGRLF
LKGSPSVDEEMTSSYSTSTGLDTGTSTLSTPCPKTAAFPPSPGIAVQECAGSGRTPSTNA
EVINIPSDQRQEGPSPGGHMARSISTFCPQDGAPTINHRLPASGSLPSRLNEATDPLNME
WRLHNPEPVTVPYLSPLVLWKELESLLENEGDSVITEADMVDQHPIIYWNLVWYFRRLDL
PSNLPGLMLTSEHCNRGSQVPRHWMSEDSKHVLIQILWDNLKLHQDSIQPLYILWNTFNV
GYPLSRPVPEEERPFSEELLQSVVRSIQRNDLSRPMAQLLQLLGTTLGVKRQRSLYRDIL
FLSLVALGKDNIDIDAFDREYKLAYDRLLPSVVKLTHNCDRPPSTGVMECRRTFGEPYL
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacaaaggccctcgtgtagccgactactttgtggtggccggtctgacagac
ccgtccaagccgttggaccaggagatccactttgatgacgtgtgccacaagtcggccaag
cctaaggcgcccatcactgatgtcgccgtggtgatccgctccatgggcgaggagacgccg
cctgggttcacctgcgtagaggaaaccccaacaggccattcagctgatctgaacaatggc
ggcctcatggtgccccagatcttcctctgctaccggagaggtcgcgacaagccacccctc
actgacctgggcgtgctgtacgagtggaaggagcgcctgaagccgggctgtcagctgatc
cagaccacgccctccggtcgccccgccaacatcagcggaaactcctcccagcgcatctac
gtcacctaccgccgggcccctgagagccagccacacagcgcgctggccctcaccgacatc
tgcatcatcgtcccgagcaagggagagacgcccccccacaccttctgcaaggtggagaag
aacctcaacagcagcatgtggggctcctctgtctacctgtgttataagaagtctgtggcc
aaaaccaacacaatagcctacaaagcaggtttattcagcagatatccagaggaggactat
gagtcattccctctgccagagtctgtccctctcttctgccttccaatgggggccacgatt
gagtgctggccagcgaacaccaaatactccctccccgtgttctccacctttgtcctcacc
ggttcctctggagagaaggtgtacggtgccgccatccagttctacgagcccttcccccag
gtgtgtctgactgatgtgcagcgctcccagctgggtctcctgagtccagatccagtacca
ccagcctcctccagctgtacggagacatccaccagcaccaccagcagcccggccaaagcc
caatgctccgtctacaccaacaagtgcatctgtctgctttcccactggcccttcttcgac
gctttccgcaagttcctcacattcctatatcgctactccatctcctgccctcacgccctg
cccatcgagaagcacatctctcattttatgcacaaagttcccttcccttcctctcagagg
cctcgcatcctggtgcagctttcccctcatgacagcctgatgttgagccagccagtgtct
tctcccttaccgctcagcggtggtcgattttccacgctgctccagaacctcggaccagag
aacgccgtcaccctgctggtgtttgccgtcactgaacacaagatcctggtgcactcgtta
cgccccgccgtgctgaccagcgtcaccgaggctctggtgtcgatgatcttcccgttccac
tggcagtgcccgtatattcctctgtgcccactggcgctggctgacgtattaagcgccccc
tgtccattcatcgtaggagtggactcccgctactttgacctttatgaccccccaccagat
gtgagctgcgtggatctggacacaaacaccatcttccacaatgaagataagcgagccctc
acgtggaagatcctgccaaaaaaagcctgtaaaaacctgatgaatgtgctgagcagtctc
caccagcagctggtcgacggtcagcagcgtcctgacgggctgctggagctgagcatgaat
gatttgacagagctgagctgtggtaagagcctccacacgctggagctggagatccaggaa
gcctttctgcgcttcatggcggccattttgaaaggctaccgctcattcttgcgacccatc
acccaggcaccttctgagaaagcgacggacgccagctccctctttgacctgcaagggttc
ttaaagagccgggaccgctcccatcagaagttctactcgctgatgaccaaaacgcaaatg
ttcatccgctttattgaggaatgttctttcgtcagcgacaaagacgccagtctggccttc
ttcgacgactgtgtggacaaactctacaattccgagcggtgtgcagacaaagcaggcaag
gtggacgctgacaggccggaggagagccggctgatagagattgatgagtctcagcgcagc
gagcacacagtcttcatcacgcctccagagctgccccccctgcctgagggggaggaacat
ccactctgctacaggtacgatggcttcccagtgttaactcttgacctgtttgaccctgtg
gagggcctgcggaccccctcctcccgcctcactgccaagcaaagctgtcccactagccct
gcccccatgttcagacgcaccaagcaggagatcaaaacagcccagaagatagccaagaag
tactcgtccatccctcagctgtggtccaagtgcctgctccgtcactgctacggcctgtgg
ttcatctgcctgccagcgtacgtcaaggtgtgccactccaaggttcgggcactgcgcaca
gcctatgacgtcctcaggaagatgcaggctaagaaactgcagccacctgatgaggtctgt
taccgggtgctgatgcagctgtgtggacagtacggccaacctgtcctggcagtcagggtc
ctctttgagatgaagaaggccggagtccaccccaacgcaatcacctacggctactacaac
aaggcggtgctggagagcacgtggccctccagcaccagaggagggtacttcctgtggatg
aagctgagaaatgtaattctgggagtggcccagttcaaacaggccctacgacgaaaggct
gcccacacacagagtcctctgtcagatggcagcgacctggacgctgtgagtcacggcagc
ctggatagctctgccgacactaacctgggccccttcgcctctgactccgccaaagtagac
cccattgatgataaatctagcacaggcgatcaatcggatctgggttataactcactgtcc
aaggaggaggtccggagaggagaccccggcgctccggactccaaagatgacaagaaagag
agcgactgcagctccttgtcagagacagagagcgccaaggggagcaaagactgcctccct
cagctggacatggagcttcactcgtccttcaaaccccgcggcattgtgcgcagcagctat
ccgtatgacgaagcctcctgtaagcccaagagctccgtcagcgcgggccatgttgcaggc
ctcctcttttcctcctccctggacaacatcggtgaggtccacggcaacagattgctcagg
aaacacaggagtgctctggaggaggtggtgggcagcggctcggctctcgactggcagggg
gggaggggccgccagctgagcggggacacggtgggcagcagcggcaccactgtcctgggc
ctggggatgagccagggggaaacagacccagataagatcgcgggacacatgggcgcagac
gtcaaaattctctctggtgccaaattcagtcagaggaagagacctcgttcgctggctctg
ggcgggatagagggggcggctgcttccagaagtcttgatcacggggaagaagaggaagag
gcggagggacaggactccagtgatgaggacagaggtaacacagaggccatttttgatttg
gaggatctggatttagacaagcctgccacaggggctggcatcagctcacacaaatgtaac
aagaaacctgtcagacgcagcgtgagctacgggggcgtgagctccatgacgaccagagga
actgtgaagcgcacagacatacagatgggctacgaccctctgtccctcctggtggcagag
acacagtccgaggagcagtgtgaggaccggtacccagagggggacgaggacagcactccc
agcgcccgaaggcacctggccagagagatcgagctctacatgaaccacatgggcagcccg
ctgagcagcaggacccccagcatggacctgcaggactccgccagccccctcctcctccac
ccctcctccctctcggcaccccgcagaaccagcctgccccacagctcccccctcagggct
gctgggatgccgcgctcctgcaccttccacccgccctcgccctcccagtccgtctcacgc
cagcgcctgctctcgtccccctcctgccacagctccagcaccacccccagcgccagcccc
cgccccagcccctacagggagaggacggacaggatgagcctggcgtcgccttccccctcc
tcttcctctttcgctctggacaccctgatcacaccaacgctcgatgtattcaagaccagc
atgttctccgctgggaagggcgtggcagagaaggccagccgctggtactcccgcctctcc
acatacacaacgcctaccaaggacggtcacagtgaccgcctgagtatttcctcccttggc
ttgggagatccagactgcgcctcgctgctggatgacgaggactgtgatggctccttgatc
tctccacagaggaacggcccctcagggccccgcaggagcccccgacgcagcccccgacgc
agccccctgcgcagcacacagcacagcccctctgccggccacagcctgggcagacccaca
tctctgttccctggatgtgtgctctccccccccggcttccctctgccagacgggtcggac
ctcggctcttcacgctacaccagcagcaccagcatcttcaacaactacgccatggagctg
ctgatctccagctgttcccgctgtaagacgtgcgactgcctggtgtacgatgaggagatc
atggccggctggactgcggacgactccaacctgaacaccacctgccccttctgtgggaac
cccttcctgcccttcctcaacgtggagctcagggacatgcgaggccccggcaggcttttt
ctgaagggcagcccgtcggtggacgaggagatgacctcgtcgtactccacatccacgggt
ttggacacggggacgtccaccttgtccaccccgtgtcctaaaacagctgcctttcctccc
tcccctgggatcgctgtccaggagtgcgccgggagtggaaggactccatcgaccaatgct
gaagttatcaacatcccgtctgaccagcggcaggagggtccgtcccctggggggcacatg
gcccgcagcatcagcaccttctgtccccaggacggagcaccaacaattaaccaccgtttg
ccggcgtcaggcagcctgcccagccgtctgaatgaagccacagacccgctgaatatggag
tggcggctccacaaccctgagccggtgacggtgccctacctgagcccgctggtgctgtgg
aaggagctggagagcctgctggagaacgagggcgactctgtgatcaccgaggccgacatg
gtggaccagcatcccatcatctactggaacctggtctggtacttcaggcgcctggacctg
cccagcaacctgcccggactcatgctcacctcggagcactgcaacagaggctcccaggtt
cctcgtcactggatgtcggaggacagtaaacacgtgttgatccagatcctgtgggacaac
ctgaagctgcaccaggactccatccagcctctctacatcctctggaacacattcaacgtg
gggtaccctctgtcccggccggtcccggaggaggagaggccgttcagcgaagagctgctg
cagagcgtggtgaggagcatccagaggaacgacctgagccggcccatggcccagctgctg
cagctgctgggcaccacgctcggggtcaaacggcagaggagtttgtacagagacatcctc
ttcctctccctggtggctctgggaaaagataacatcgatattgacgcatttgatcgagag
tacaagctggcgtacgaccgcctcctgccgagcgtagtgaagctgacccacaactgtgac
cgcccccccagcacgggggtcatggagtgccggaggacctttggggagccttacctgtaa
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