Pseudochaenichthys georgianus (South Georgia icefish): 117463746
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Entry
117463746 CDS
T09629
Name
(RefSeq) uncharacterized protein
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117463746
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117463746
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117463746
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117463746
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117463746
UBL E3 ligases
117463746
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117463746
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117463746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
MecA
DUF4484
PWI
Motif
Other DBs
NCBI-GeneID:
117463746
NCBI-ProteinID:
XP_033962045
LinkDB
All DBs
Position
18:complement(359037..370403)
Genome browser
AA seq
1545 aa
AA seq
DB search
MAPTRMKLRVRIRDSNTAASTTGSTEPVEEEERSRGVRSSSRRKKKSTPSTPTASSSSPP
PPPPPPLPLASSSSSSLPVPEEASPDSKCPICLDRFNNLAYLDRCLHRFCFPCIQEWSHS
KAECPLCKQPFASILHSVLAEDDFKEYTLRPPTPASSSVAATVAMVAAMASAARNDHQMR
LMLRRQRREEEEGGVGGEAVRRRRRRGDRERGGRGGRGGVWEWYINSRPVRMEENEEEEE
SEEQRRDVDEALDRGVIFEGLSGLVPPGDPPVAPGDRASRRLTSRLVSRRRLQRDGGAVR
RLRDRETVAFRRSLYRLGVRVHGVAGVSAELLPHDITADSFRLSPAPLERLRPWLRRELT
VLYGVHTSLVDIVQRIVTARLQRHGLEDQNTIEEELRPFLLARTNHFLHEMVSFASSPLA
LESYDLEAVYEPPDDAIVQLNDDSSDGSVIAISEEEEEEEMDEEEAGNDEIPTGSCLSLA
AWDDETPGPSYSLSPANQEAAGKDEEGEEEEECLIVGYKKPIAERTPELVQLTSDSEEEE
EKMKEEEEDKKEEEEKKKEDEEEELPAVAPPLPQSPTIPPPVTGCNKDGGSWSSPERDRK
EKKKTKRRKRKTSGTLFNPNRSIFPAMMRRRSSSAESSPPDSHWDGSSSSSSSSSSSSSP
MENHGEKPGGKRKYKSRHLDRDEKDPTWRPREDKERRRRSREDEERKERRREDRSPSVEI
IYEGTILPNAAHPPARKRRRKRQRKSQHSSSPVIITLDSDSSHEANNNNNSSCSSSPISS
QQTVDFSDLPPLPLVHPSGVGGALSGEIGDLPVDILDPIAINSDIDVENFEVGGSSLDEE
PIRTSDLSDDAEVTNSSLKRKSISDSRLLARILNDLQGINTAKLNPLNFEPRDSRRNRFL
RDDNIDHRDFDPPTYRNVTHPLTYFERLKEKEVPPLLKQASPVRTYNRNTPPPLKHKDAG
SPHLSPISPIDLHSNPTIDVSQGNRAIPPISTLKKQFTSALALRGELASTSSAIDSHFSK
VGVHSTSQNPPIDSHSSSSETGSTSAACLSHLDFNLIPPAKETSSSTVDLHPVNSLSPFE
CHTAKTGWSNDKLANADSRNKTLRPDYCHFSPVGLHPSGRGGEDFSGVFCNDKSPFVSSI
DAFPPIDSHSSSKRDNFSGRYAPSTAPSNRLSPIDMHPKSPKHTADLHSSSKRYHFLESL
STSRASSEVITAPRSSYSPIDLHPKSPKHTADLHSLSRRDNFLESLSTSRASSEVITAPR
SSYSPIDLHPKSPKHTADLHSLSWRDNFLESLSTSRASSEVKTAPRSSYSPIDLHPISPK
STVDLQTSSKKDNFPESLSTSRDNSMPTTAPRLSPIDGHLKIPKYTADFHSSSKREKLSE
RLSRSVLTPATSDRWSPIDLHLKSPESTGDFHSFSTTSKGLTNNKASLLVNHGDALPHGR
LTPVDLHHTSPFPPINTHPSSSHFNHTALTAATFQTSRKRSSSQSEATIDSHSKPQNHHN
RFPTDALSQNSLPIDSHLKNSRADNHVENQWNSNSPIDAHSDSAT
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccaggatgaagctgcgcgttcgtattcgagacagcaacacggcggcttca
acgacaggaagtactgaacctgtggaggaagaggagcgaagccgaggcgtccgcagcagc
agcaggaggaagaagaaaagcacccccagtactcccactgcctcttcgtcctcacctcct
cctcctcctcctcctcctcttcctctcgcctcctcctcttcctcgtctcttccggtgcca
gaggaggcgtctccagactcaaagtgtcccatctgcctggaccggtttaacaacttggcg
tatctggaccgctgcctgcaccggttctgcttcccctgcatccaggagtggtctcacagc
aaggccgagtgtccgctctgcaagcagcccttcgcctccatcctgcactccgtcctcgct
gaagacgacttcaaggaatacactctgcgcccccccacgcccgccagcagcagcgtggcc
gccaccgtcgccatggtggccgccatggcgtccgcagcgaggaacgaccaccagatgagg
ctgatgctgaggaggcagaggagggaggaagaggaggggggagtggggggggaggcagtg
aggaggaggaggaggaggggggatagagagaggggaggaagaggaggaagaggaggggtt
tgggagtggtacatcaactctagaccagtcaggatggaggagaacgaggaggaagaggag
agcgaggagcaacgacgggacgttgacgaggcgttggatcgaggcgttatcttcgagggt
ctgtcgggcctcgtcccccccggcgacccccccgttgcccccggcgaccgtgcgtctcgc
cgcctgacgtcccgcctggtgtctcgccgccgcctgcagcgcgacgggggggcggtgcgg
cgcctcagggatcgagagaccgtggcgtttcggcgctcgctctatcgtctcggcgtgcga
gtgcacggggtcgccggcgtctccgctgagctgctgccgcatgacatcacagccgacagc
tttcgcctaagccccgcccccttggaaaggctccgcccctggctgcgccgcgagctaacg
gtgctttacggtgttcacacgtccttagtggatatcgtgcagagaatcgttacagcgagg
cttcaacgacacggcctggaggaccagaacaccatagaagaagagttacgcccattcctc
ttggcgcgaacaaaccacttcctgcacgaaatggttagcttcgcaagctcgccgttagcg
ttggaaagctacgatttagaggcggtttacgagccgccggacgatgctatcgtgcagcta
aacgacgacagcagcgacgggtccgttatcgctatttcagaagaagaggaagaggaggaa
atggacgaagaagaggcgggaaacgatgaaatcccgacaggaagttgcctcagtttggcg
gcgtgggacgacgagacgccaggcccctcctactctctgagcccggccaatcaggaggcg
gcagggaaggatgaagagggagaagaggaagaggagtgtttgatcgttgggtacaagaaa
ccgatcgcagaacgaacgccggagctggtgcagctgacgtcagatagtgaggaagaggag
gagaagatgaaggaggaagaggaagataagaaggaggaggaagagaagaagaaggaagat
gaagaggaggaacttcctgctgtcgctcctcctcttcctcaatctcccacaatccctcct
cccgttactggctgtaacaaagatggcggctcgtggtcgtccccagagagagacaggaaa
gagaaaaagaagacgaagaggaggaagaggaagacgagcggcactttattcaacccgaat
cgttctatttttcccgccatgatgcgccgccgctcctccagcgccgagtccagcccgccg
gattctcactgggacggctcttcgtcatcttcctcatcctcctcttcctcttcctccccc
atggaaaaccacggggagaaaccgggagggaagaggaaatacaaaagccgccatctggac
cgcgatgagaaggatccgacatggcggccgcgggaggacaaggagcgccggaggaggagc
cgggaggacgaggagaggaaggagaggagacgagaggatcgcagtcccagcgttgagatc
atctacgagggaaccatcctccccaatgcagcccacccccccgctaggaaacgccgcagg
aaacgccaacgcaagagccagcacagcagttctccggtcatcatcacgctggatagcgac
agcagccacgaggctaacaacaacaacaacagcagctgcagcagcagtccaatcagcagc
cagcagaccgttgacttctcagaccttcctcccctcccattggtccatccctccggagtg
ggcggggctttgagcggtgaaatcggcgatcttcccgtcgacatcctggatccaatcgcc
atcaacagtgacatcgatgtggaaaactttgaagtgggcgggtcctcattggacgaggag
ccaatcagaacgtccgatttatccgatgacgcggaggtcacaaattcatcacttaaaaga
aagtcgatttctgacagccgtctgttagcgaggatcctcaacgacctgcagggaatcaat
acggctaaattgaacccgttgaacttcgagccacgtgattccagaagaaatcgcttttta
agggacgacaatattgatcatcgggacttcgacccgccgacgtatcgtaacgtcacccac
ccgttgacttattttgagcggttaaaagaaaaggaagtcccgcctctcttaaaacaggcg
agtcccgttcggacgtacaacagaaacacaccgccaccgttaaaacacaaagacgccggg
agtccacacctgtcgccgatttctcccattgacctccattcaaatcccaccattgacgtg
tctcaaggtaatcgcgccatcccacccatttcaacgctgaaaaaacagttcacgagcgct
ctggctctgagaggagagctggcctccactagttcagccattgactcccatttttctaaa
gtcggcgtccattccacgagtcaaaatcctcccattgattcccattcttcttcttctgaa
actggctccacgagtgctgcttgcttatcacatctggatttcaacttgatcccccccgca
aaggaaacctcatcttcaaccgttgacttgcatcctgtgaattctttatctccctttgaa
tgccacacggccaagacaggatggtccaatgataagctagctaacgccgactctaggaat
aagactctgagaccagattactgtcatttttcacccgttggcctccatccttccgggcgg
ggtggagaagatttctcaggagttttctgtaacgacaaatcaccgtttgtttcatccatc
gatgcattcccaccaattgactcccactcttccagtaagagagataactttagtggtaga
tatgcgccatcaacagctccaagcaacaggttgtcacccattgacatgcatcctaaaagt
ccaaaacataccgctgacctccactcttcaagtaagagatatcactttttggaaagtctt
tcaacctctagagctagctcggaggtaataacggctcccagaagcagctattcacccatt
gacttgcatcctaaaagtccaaaacataccgctgacctccactctttaagtaggagagat
aactttttggaaagtctttcaacctctagagctagctcggaggtaataacggctcccaga
agcagctattcacccattgacttgcatcctaaaagtccaaaacataccgctgacctccac
tctttaagttggagggataactttttggaaagtctttcaacctctagagctagctcggag
gtaaaaacggctcccagaagcagctattcacccattgacttgcatcctataagtcccaaa
tctaccgttgacctacaaacatccagtaagaaagataactttccagaaagtctttcaact
tcgagagataactcaatgccaaccacagctcccaggttatcacccattgacgggcatctt
aaaattcccaaatataccgctgacttccactcttccagtaagagagagaaattgtcagaa
aggctatcaagatcagtgttaacaccggctacaagtgacaggtggtcacccattgacttg
catcttaaaagtccagaatctaccggtgacttccactctttcagcacaacttctaaagga
ctgacgaacaacaaagcatcgttgttagtcaatcatggggatgcattgcctcatgggcgc
ctgacacccgttgacttgcatcatacgagtccctttccccccattaacacacatccttcc
agctcacactttaaccacacagccttaaccgccgctaccttccaaacatcacgtaaaaga
agcagttctcagtccgaggctaccattgactcccactcaaagcctcaaaaccaccacaat
aggttccccactgacgctctttcgcagaatagtctccccattgactcccatctaaaaaac
tctcgggcggacaatcacgtggagaaccagtggaactccaactcacccattgacgcccat
tcagactctgccacgtag
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integrated database retrieval system
