Pseudochaenichthys georgianus (South Georgia icefish): 117463772
Help
Entry
117463772 CDS
T09629
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04137
Mitophagy - animal
pgeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117463772
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117463772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117463772
03009 Ribosome biogenesis [BR:
pgeo03009
]
117463772
04131 Membrane trafficking [BR:
pgeo04131
]
117463772
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117463772
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117463772
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117463772
Membrane trafficking [BR:
pgeo04131
]
SNARE
SNARE associated proteins
Others
117463772
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117463772
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117463772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_33
CDC48_2
AAA_2
AAA_22
TIP49
AAA_14
Vps4_C
RNA_helicase
NPHP3_N
Parvo_NS1
AAA_28
ATPase_2
nSTAND3
Mg_chelatase
ATPase
DUF815
IstB_IS21
AAA_7
AAA_18
ABC_tran
AAA_17
NACHT
TsaE
ResIII
AAA_24
Sigma54_activat
PhoH
NB-ARC
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Cytidylate_kin
Rad17
ORC-CDC6-like
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
117463772
NCBI-ProteinID:
XP_033962138
LinkDB
All DBs
Position
1:18489318..18504731
Genome browser
AA seq
815 aa
AA seq
DB search
MPSSGGADPKGKDFSTAILKQKHRPNRLIVDEVLTDLNKAHNEDGSIVSLSQDKMEELQL
FRGDTVVLKGRKRRQTVCIVLTDNTCGQERVRMNRVTRNNLRVRLGDVISIHACPDIKYG
KRIHVLPIDDTIEGLSGNLFDVFLKPYFLESYRPVHQGDIFLVRGSMRGVEFKVVETDPG
PHCIVAPDTVIYCEGDPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFK
AIGVKPPRGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE
EAEKNAPAIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPN
SIDPALRRFGRFDREIDIGIPDSTGRLEILQIHTKNMKLGDDIDMERIAKETHGHVGADM
AALCSEAALQAIRKKLTLIDLEDDTIDADLLNSLAVTMDDFQWALSQSNPSALRETVAEV
PQVNWEDVGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAI
AHECQANFISIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAG
DGSGAADRVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKA
SRTAILNANLRKSPIAKDVNLDFLSGITEGFSGADLTEICQRACKMAIREAIEAEIKAER
ERQNRPGVPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFSQTLQQSRGFGNF
RFPSATGTRSGGQGSDSGSGGPGPQSEESNDDLYQ
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcagggggagcagatccaaagggaaaagatttctccactgccatcctgaag
cagaaacacagacccaacagactcattgtggacgaagtgctcactgatctcaacaaagct
cacaatgaagacggaagcatcgtcagcctgtcacaggataagatggaggagctgcagctg
ttccggggggacacggtggtgttgaaagggaggaagcgtcgccaaacggtgtgcatcgtc
ctgactgataacacctgtgggcaagaacgagtccgcatgaaccgtgtgacgcgcaacaac
ctgcgtgtccggctcggtgatgtcatcagtattcatgcctgccctgatatcaagtatggg
aaacggatccatgtcctcccaatagatgacaccattgagggcctgtctggaaacctcttt
gacgttttcctcaaaccgtacttcctggagtcttaccggcccgtccatcaaggggacatc
ttcttggtgagggggagcatgaggggggtggagttcaaggtggtggagactgatcctggc
cctcactgcatcgtagccccggacactgtcatctactgcgagggagacccaatcaaaaga
gaggatgaggaagagagccttaacgacatcggctacgacgacatcggaggctgtcggaag
cagctggcgcagatcaaagagatggtggagcttcctctcagacacccgggcctcttcaag
gctataggagtgaagccccccagagggatcctgctgtacggccctgcaggcacagggaag
accctggtggcccgggctgtggccaatgaaactggggcctttttcttcctcatcaacggt
ccggagatcatgagtaagctggcaggagagtcagagagcaacctaaggaaggcgtttgag
gaggcggagaagaacgctccggccatcatctttattgatgagctggactccatcgctcct
aagagagagaagacccatggtgaagtggagaggcgtatagtctcgcagctcctgaccctg
atggatggcctgaagcaaagagctcatgtagtcgtcatggcagccacaaaccgaccaaac
agcattgaccctgctctgagacgctttggcaggtttgaccgggagattgacattggaatc
cctgattccaccggcagactggagatcctgcagattcacaccaaaaacatgaagctcggg
gacgacattgacatggagaggattgccaaagagacccacggtcatgtaggcgctgacatg
gcggctctgtgctctgaagctgctctgcaagctatccgcaagaagctgaccctcatcgac
ctggaggatgataccatcgatgcagacctgctcaactcactggctgtcaccatggacgac
ttccagtgggcgctgagtcagagcaacccctcggctctgagagagactgttgcagaggtg
cctcaggtgaactgggaggacgttggaggactggacgaggtcaagagagaactgcaagag
cttgttcagtaccctgtggagtatccagacaagttcctgaagtttggtatgactccgtct
cggggagtgttgttctacggccctccaggctgcgggaaaactctgctggctaaggccatc
gcccacgagtgccaagctaacttcatctccatcaaaggacccgagatgctcaccatgtgg
tttggagaatctgaggccaatgtcagagacgtgtttgataaggccagacaggcagccccc
tgcatcctgttttttgatgagttggactctattgccaaatccagaggagggggagcaggg
gatggaagcggtgcagctgacagagtcatcaaccagatactcacagagatggacggcatg
tcggacaagaagaatgttttcattattggagccacgaacaggccagacatcattgacagt
gccatcctgcggccgggtcgtttggaccagctcatctacatcccgctgccggacaaagcg
tctcgcacagcaatcctgaacgccaaccttcgcaagtctcctattgcaaaggatgtgaac
ctggacttcctttctggcatcactgagggtttctctggagcagacctgacagagatctgc
cagcgggcctgtaagatggccatccgtgaggccatcgaggccgagatcaaggctgagcgc
gagaggcagaaccgacccggcgtccccatggatgaagactttgatccagtcccagagatc
aggaaggaccactttgaggaggcgatgcgattcgctcgtcgctccgtcagtgacaatgac
atccgcaaatatgaaatgttttctcaaactctgcagcagagccggggttttggaaacttc
aggttcccctctgctactggtacccggtctggaggtcaggggtcagactctgggtcaggg
gggccgggaccgcaaagtgaggaaagcaatgatgatctctatcagtga
DBGET
integrated database retrieval system
