Pseudochaenichthys georgianus (South Georgia icefish): 117463774
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Entry
117463774 CDS
T09629
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117463774
Pattern recognition receptors [BR:
pgeo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117463774
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
WHD_NOD2
PRY
LRR_6
SPRY
LRR_4
Secretin_N_2
Motif
Other DBs
NCBI-GeneID:
117463774
NCBI-ProteinID:
XP_071057786
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All DBs
Position
3:complement(50953142..50960116)
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AA seq
1068 aa
AA seq
DB search
MKSDQSMPHPIVFKSRSYSPEVHQQRSEGPGGQSAQQHQTDLDSIFMLLEENIVTFVKNE
LKKIQTVLTSDYPECLESQSEDEEVLDGEDEEDEEQRRSSREAFLNISLHFLRSMKQEAL
ADLLHSRTAAAVCQRKLKSTLKERFRCVFEGIAKAGNPTLLNQIYTELYITEGGAAEVND
EHEVRQIETASRKPDRPETTIRQEDLFKAGRDAPIRAVLTKGVAGIGKTVLTQKFTLDWA
EGKANQDIQFTFPFTFRELNVVRDNKYSLVELVHHFFSETRDAGICRFDLFPVVFIFDGL
DESRLPLDFLNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVD
MVTEVRGFTDPQKEEYFRKRFRDQEQAGTIISHIKTSRSLHIMCHIPVFCWISASVLEEV
LKTREGGELPKTLTEMYIHFLVVQSKVKNIKYDGGAETDAHWSPESRKMMESLGKLAFEQ
LLKGILIFYESDLTECGIDIRAASVYSGVFTQVFREERGLYQDKVFCFVHLSVQEFLAAL
HVHLTFIDSGVNLLAEEPTTSQQSEDKPKLTLLYQSAVDQALQSPNGHLDLFLRFFLGLS
LQTNQTLLRGLLTQTGSDSGTEEETVQYIKKRIDEDLSPERSINLFHCLNELNDRSLVEQ
IQQSLSSGSLSTDNLSPAQWSALVFILLSSGEDLDVFDLQKYSASEEALLRLLPVVKASR
KALLGGCNLSERSCEALSKVLSSKSSSLRELDLSNNDLQDSGVKHLSAGLESPHCELETL
RLSGCLVTNKGCASLTSALTTNPSHLRELDLSCNHPGDSGAKLLSVLLEDPQCRLDTLKA
DLCGEHRLKPDVRKYACELTLDSITAHTSLKLSDNNREVTCVGEKQPSPDHPERFDFCLQ
LMCREALTGLCYWEVEWRGEVSISVTYRGIRRRGGRADCEFGGNDQSWSLSCSDVGYNVR
HNKTSILSSSSSSSSSSSSSSSSSSSSSSSSSSGRVAVYLDHPAGSLSFYRVCSDKLIHL
QTIRTTFTESLYAGFGFCSPDSSVSLCSLWEETTSCPVLMSLVSGDIT
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgaccagtctatgcctcaccctatcgtgtttaaatctcgttcttatagtcca
gaagttcaccagcagagatcagagggtcctggtggtcagtctgcccagcagcatcaaact
gacctggactccatatttatgctgctggaggagaacattgtcacttttgtgaagaacgag
ctgaagaagatccagacagtcctgacttcagattacccagaatgcttagagagtcagagt
gaggatgaggaggtgttggatggtgaggatgaagaggatgaagagcagaggaggagcagc
agagaggcatttctgaacatctcactgcacttcctgaggagcatgaagcaggaggcgctg
gctgaccttctgcacagcagaactgctgctgcagtctgccaacgtaaactcaaatccacc
ctgaaggagaggttccggtgtgtgtttgagggcattgctaaagcaggaaacccaaccctt
ctgaaccagatctacacagagctctacatcacagaggggggggctgcagaggtcaatgat
gaacatgaggtcaggcagattgaaacagcatccaggaaaccagaccgaccagaaaccacc
atcagacaagaagacctgtttaaagccggaagagatgcaccaatcagagcagtgctgaca
aagggcgtggctggcattgggaagacagtcttaacacagaagttcactctggactgggct
gaaggcaaagccaaccaggacatccagttcacatttccattcaccttcagagagctgaat
gtggtgagagacaacaagtacagcttggtggaactcgttcatcacttcttctctgaaacc
agagacgcaggaatctgcaggtttgatctgttcccggtcgtgttcatctttgacggtctg
gatgagagtcgacttcctctggacttcctcaacactgagatcctgaccgatgtcacagag
tccacttcagtggatgtgctgctgacaaacctcatcagggggaagctgcttccctctgct
cgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgtggac
atggtgacagaggtccgagggttcactgacccacagaaggaggagtacttcaggaagaga
ttcagagatcaggagcaggccggcaccatcatctcccacatcaagacctcacgaagcctc
cacatcatgtgccacatcccagtcttctgctggatctctgcttcagttctggaggaggtg
ttgaaaaccagagagggaggagagctgcccaagaccctgactgagatgtacatccacttc
ctggtggttcagtccaaagtgaagaacatcaagtatgatggaggagctgagacagatgct
cactggagtccagagagcaggaagatgatggagtctctgggaaaactggcttttgagcag
ctgcttaaaggcatcctgatcttctacgagtccgacctgacagagtgtggcatcgatatc
agagcagcctcagtgtactcaggagtgttcacacaggtcttcagagaggagagaggactg
taccaggacaaggtgttctgcttcgtccatctgagcgttcaggagtttctggctgctctt
catgtccatctgaccttcattgactctggagtcaacctgctggcagaagaaccaacaacc
tcccagcagtctgaagataaacctaaactaacacttctctaccagagtgctgtggaccag
gccttacagagtccaaacggacacctggacttgttcctccgcttcttcctgggtctttct
ctgcagaccaatcagactctcctacgaggcctactcacacaaacaggaagtgactcaggg
actgaagaggaaacagtccagtacatcaagaagaggattgatgaggatctgtctccagag
agaagcatcaacctgttccactgtctgaatgaactgaatgatcgttctctagtggagcag
atccaacagtccctgagttcaggaagtctctccacagacaatctgtctcctgctcagtgg
tcagctctggtcttcatcttactgtcatcaggagaagatctagacgtgtttgacctgcag
aaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctcgagg
aaagctctgttgggtggctgtaacctgtcagagagaagctgtgaagctctgtccaaagtc
ctcagctccaagtcctctagtctgagagagctggacctgagtaacaacgacctgcaggat
tcaggagtaaagcatctgtctgctggactggagagtccacactgtgagctggagactctc
agactctcaggttgtctggtcacaaacaaaggctgtgcttctctgacttcggctctgacc
accaacccctcccatctgagagagctggacctgagctgcaatcatccaggagactccgga
gcgaagctgctgtctgttctactggaggacccacagtgcagactggacactctcaaggct
gacctttgtggagagcacaggttaaaacctgatgtgaggaaatacgcctgtgaactcaca
ctggactcaatcacagcacacacaagcctcaaactgtctgacaacaacagggaggtgaca
tgtgtgggagagaagcagccgagtccagatcatccagagaggtttgacttctgtcttcag
ctgatgtgcagagaagctctgactggtctctgttactgggaggtcgagtggagaggagag
gtttctatatcagtgacttacagagggatcaggaggagaggaggcagagcggactgtgag
tttggagggaatgatcagtcatggagtctgagctgctctgatgtgggttacaatgtccgc
cacaataagacatcaatcctctcctcctcctcctcctcctcctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctcctcctcctctggtagagtagcagtgtatctg
gatcatcctgctggctctctctccttctacagagtctgctccgacaaactgatccacctc
caaaccatcagaaccacattcactgaatctctgtatgctgggtttgggttctgttcacct
gactcctcagtgtctctgtgttctctgtgggaggagaccacttcctgtcctgttctaatg
tcccttgtctcgggggacataacatga
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integrated database retrieval system
