Pseudochaenichthys georgianus (South Georgia icefish): 117463778
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Entry
117463778 CDS
T09629
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117463778 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117463778 (taf6l)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117463778 (taf6l)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117463778 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
117463778 (taf6l)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117463778 (taf6l)
STAGA complex
117463778 (taf6l)
TFTC complex
117463778 (taf6l)
SAGA complex
117463778 (taf6l)
SLIK complex
117463778 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
117463778
NCBI-ProteinID:
XP_033962107
LinkDB
All DBs
Position
18:complement(21288382..21298383)
Genome browser
AA seq
644 aa
AA seq
DB search
MADREERRFAEVSRDSVKLMAESSGVELGDDVATLLAEDVCYRLREATQSSSQFMRHAKR
RKLTVEDFNRALRWSNVEAVCGYGAQDALPFRSAKEGELFFIEDRDINLVELALATNIPK
GCAETLVRVNVSYLDGKGNLEPQGAVPSAVQTLSEDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPNLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLSQPAEGRSGGPQVSVGGAMGYRMSSPGLSPPPEPLSDAALGIA
SHLQAGGAGCPWEEWTPVPLPAMYSELYSFFGDSLAVRFSTEPGWGSPPCTLSQHSDTKK
ESAGPASNPDTTRKMPQLTANLNISPRQDGSPRTDPPPPSLAATGPGRSLARSSSSSSSS
SVQRSRSSLSRPGQRSAGLSRDVFPKARFTPPPTGLPVFTFLIGGRQMGRRCQGRRPFQT
NFAPPPPLPAVPPRAYAHKLPVIGRVGKPVRRGAGSHYSLHLPL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgggaggagcgacgctttgccgaggtttcccgggactccgtcaaactcatg
gccgagagttcaggcgtggagctcggcgacgatgtggccacactgctggcggaggatgtg
tgttaccggctgagggaggcgactcagagcagctctcagtttatgagacatgccaagagg
aggaagctgacggtggaggacttcaacagagctctgcgctggagcaacgtggaggctgta
tgtggctacggcgcccaggatgctcttcctttccgctcagctaaagaaggagagcttttc
ttcatcgaggaccgggacatcaacctggtggagctggctctggccaccaacattcccaaa
ggctgtgcggagaccctggtgcgagtaaacgtgtcctacctggatgggaaaggaaacctg
gagcctcagggggcagttccctcagcggtgcagactctatcagaggacctgttgaagtac
taccagcagatcacacgggccatcctgggcgaggacccccacctcatgaaggtggctctg
ctggacctccagtccaactccaagatcgccgccctcctgccatacttcgtttacgtcatc
agtggggtgaagtcggtgagccacgacctggagcagctgaaccggctcctccacatggtg
aagagcctggtccagaaccccaacctgtacctgggctcgtacgtgcgcagcctggtgtcc
agcgtcatgtactgcatcctggagcccctcgccgcctccatcaacccgctcaacgaccac
tggaccctccgggactacgccgcgctgctgctcagccacatcttctggactcacggtgac
ctggtgagcggtctgtaccatcagatcctcctgtccctgcagaaggttctgtcggacccg
gtgcggcccctctgctcccactacggggccgtggtggggctccacgctctgggctggaag
gctgtagagagggtgctgttccctcacctccctgcgtactgggccaacctgcaggcggtg
ctggacgattactctgtgtccaacgcacaggtcaaagccgacgggcacaaggtgtacgga
gccatcctggtggcggtggagcggctgctgaagatgaaggctctgtcgctgagtcagcct
gcagaggggcggtctgggggtccacaggtctccgtggggggtgccatggggtacaggatg
agctcccctggcctcagcccccccccagagcctctgtcagacgccgccctgggcatcgcc
agccacctgcaggcggggggggccggctgcccctgggaggagtggacccccgttcccctg
cccgccatgtactccgagctgtactccttcttcggggacagcctggcggtccggttcagc
acggagcccgggtggggcagccccccctgcaccctgtctcagcacagtgacaccaagaag
gagtctgctggccccgcctccaacccagacaccacccgaaagatgccccagctgacggcc
aacctcaacatcagccccaggcaggacgggagccctcgcaccgacccccccccacccagc
ctggcagccaccggaccaggaaggtccctggctcgctcctcttcctcctcctcttcctcc
tcggtgcagcgctccagatcctccttgtcccgtcccggccagcgttcagccggtctgtcc
cgagacgttttccccaaagctcgcttcaccccccctcccacaggactgccggtgttcacc
ttcctgattggcgggcggcagatgggccggcgctgccagggccgccgccccttccagacc
aacttcgccccgcccccgcctcttcctgccgtcccgccacgtgcctacgcccacaaactg
cccgtcatcggcagggtgggcaaacctgtccgccggggggccggctcccattactccctt
cacctgcctctctag
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