Pseudochaenichthys georgianus (South Georgia icefish): 117463797
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Entry
117463797 CDS
T09629
Symbol
itgb6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04510
Focal adhesion
pgeo04512
ECM-receptor interaction
pgeo04810
Regulation of actin cytoskeleton
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117463797 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117463797 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117463797 (itgb6)
04810 Regulation of actin cytoskeleton
117463797 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117463797 (itgb6)
04515 Cell adhesion molecules [BR:
pgeo04515
]
117463797 (itgb6)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117463797 (itgb6)
Cell adhesion molecules [BR:
pgeo04515
]
Integrins
Integrin beta subunits
117463797 (itgb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
EGF_integrin
EGF_2
I-EGF_1
EGF_Teneurin
DUF659
Motif
Other DBs
NCBI-GeneID:
117463797
NCBI-ProteinID:
XP_033962154
LinkDB
All DBs
Position
3:27521114..27531838
Genome browser
AA seq
783 aa
AA seq
DB search
MGLILLSLILLYWINTVEGSCSAGSAAVTCDECLQLSSHCAWCTQENFTDWFSVSERCDT
LDNLLEKGCARDQLEFPVSVGQILQDHPLGKKTINDNTTQISPQKMALKLRPGTQVTFQV
KIQHTEDYPVDVYYLMDLSASMIDDLVMIKDLGTSLSKEMAKLTSKFRMGFGSFVEKPVL
PFIKITEEELANPCRGVGLHCLPTFGYKHVLSLTSSTDKFNEIIAIQRVSANIDVPECGF
DAVMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMAGIVIPNDGQCHLDVNNEYSM
STVLEYPTLGQLIDKVVENNILLIFAVTEGEQNNYKNYADLIPGATVGVVAKDSRNILEL
IVTAYKELRSEIELEVLGDTEELHMSFTAICPNGTVFHDQKNCSNIKPGETVVFNVTVEL
PECLSGVRHFSLKPVGLQDSLEVELESLCSCDCRHTPEANSSQCTEGQGAFQCGVCVCHP
GFLGAECECNEESALLSNCLANNESEICSGQGQCYCGECVCHASSFGRIYGPYCECNNYS
CVRFRGELCGGHGVCDCGECHCESGWTGEYCNCSSSTDACMSEDGALCSGQGRCECGHCV
CSVTGASGDKCEKCPTCGDACTSARDCVECHLQDDDDAELCDQKCSVPKISINTTADYDK
SPSMKCKLMMEDECWVSFNVVGGETGITAYDLLKFGCPEPPNIPMIILGVSLSIVCIGLI
LLAVWKVLVSVHDRKEVAKFEAERAKAKWQTGTNPLFKSSTSTFKNVTYKKTEREKIITL
GHY
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggggcttatactgctgagcctgattctcctgtactggatcaacaccgtggagggatca
tgttcagctggcagcgctgcagtgacctgtgatgagtgtctgcagctcagctctcactgt
gcctggtgcacacaggagaatttcacagactggttttcagtcagtgagcgatgtgacacg
ctggataacttattagaaaagggatgtgccagggaccagctggagttccctgtttccgtg
ggtcaaatcttgcaagatcacccacttgggaagaaaacaatcaacgacaacaccacccag
atctccccacagaaaatggccctcaagctgcgacctggcactcaggtgactttccaggtc
aagattcaacacactgaggactatcctgtggacgtctactacctgatggacctgtcggcg
tccatgatcgacgatcttgtgatgatcaaagacttgggcacctctctatctaaagagatg
gccaagctcaccagtaaattccgaatgggctttggttcctttgtggagaaacccgtcctg
cccttcatcaagatcacagaagaagagctggctaacccctgcaggggtgtaggcttgcac
tgcctgccaacatttggctataaacacgtcttgtctctgacgagcagtactgacaagttc
aacgaaataattgcaatacagcgcgtttcagcaaacattgatgtgccagagtgtggcttt
gacgctgtcatgcaggcagctgtttgtggggacaaaataggctggaggaatgactcgatg
cgtttgctggtgtttgtcagtgatgctgactcacactttgggatggacagtaagatggct
ggcatcgtgattcccaacgatggtcagtgtcacctggatgtcaacaacgaatactccatg
tccacagtgctggagtatcccactcttggtcagctgattgataaggtggtggagaacaac
atcctactgatatttgctgtaacagaaggagaacaaaataactacaagaactatgcagat
ctcatacctggcgccacagttggagttgtggcgaaggattcgcggaacatcctggaactg
attgtaacagcgtacaaagaactgcgttcggagatcgagctcgaggtccttggagacaca
gaagagctccacatgtcttttacagccatttgcccaaatgggaccgtcttccatgatcag
aagaactgctccaacatcaaacctggagaaacggtagtgttcaacgtgactgtggagctg
cctgaatgcctgtccggagttcggcacttctccctgaagccggtgggtttacaggacagt
ctggaggtggaactggagtctctctgctcgtgtgactgtaggcatactcctgaagcaaac
agcagccagtgcaccgagggccagggggctttccagtgtggagtgtgtgtgtgtcacccg
gggttcctgggagcagagtgtgaatgcaatgaggaaagcgctttgttgagcaactgcctc
gcaaacaatgagtctgagatatgcagtggtcaggggcagtgctactgcggagagtgtgtg
tgtcatgcttccagttttggacgcatctacggaccttactgcgagtgtaacaactactcc
tgtgttcgtttccggggggagctctgtggaggccacggggtgtgtgactgcggggagtgt
cactgtgaaagcggatggacgggggagtactgtaactgcagcagcagcactgatgcgtgc
atgtcagaggatggagctctctgcagcgggcaggggaggtgcgagtgtggccactgtgtg
tgctcggtaactggagcatctggggacaagtgtgagaagtgcccaacatgcggagacgcc
tgtacctctgcaagggactgtgttgagtgccatctgcaagatgacgacgatgcagagttg
tgtgatcaaaagtgcagcgtccctaaaatatccatcaacacgactgcagattatgacaag
agcccttctatgaaatgcaagctgatgatggaggatgagtgctgggtatcatttaatgtg
gtaggaggtgagacagggatcacggcctatgatctcctgaagtttggttgcccggagcca
cctaacatccccatgattattctcggcgtctccctatccattgtgtgtatcggcctgatc
ctcctggcagtgtggaaggtgctcgtgtctgtccacgatcgcaaagaggtggctaagttt
gaggccgagagggcaaaggcaaaatggcaaacggggaccaaccctttgttcaaaagctca
acgtctacattcaaaaatgtaacttataagaaaacagagagagaaaagatcattacgctg
ggtcactactga
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