Pseudochaenichthys georgianus (South Georgia icefish): 117463810
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Entry
117463810 CDS
T09629
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117463810 (gigyf1a)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117463810 (gigyf1a)
Surveillance factors
Other surveillance factors
117463810 (gigyf1a)
BRITE hierarchy
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
117463810
NCBI-ProteinID:
XP_033962166
LinkDB
All DBs
Position
18:13770069..13789364
Genome browser
AA seq
1127 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGATAPAGVVRGRG
AARGGRGRGRGEGGFYQRSIEEPEVGFGRGVREIHRSQSWDDRAERRFEKPIRREVGRPG
FEEPVVPVVPGRKDFTRADSDNWRILREEQQEEEEEAAAAGGGGVVVVEPGTNWRLTGVR
RDDGGPRSAGWREHTGPGEGRRRKFDFDFRDADGHGGGRRREGLDDGDGLPEWCTDEEDG
EMGTFDSSGAFMALKKGDKDIILEEEFDFKGIEDEEDEEFYADMERNSAEEDKESKEAGS
AVRDDETKPASPSSSPPALQHCTPPSVEHRPSNAGLLVDNAQLNNSHPVKASSAPSEGTP
YFTSEATDRWIQLAALLDMAPVGVSKSQLSPSAPPSSRMPPPPPSSAAPLHPPPGGDTED
DEGMKHLQQEAEKMVASLQDTSLEEECFTQALQQQQECRNTAAALPLSHEAAMKWFYKDP
QGEIQGPFTTVEMCEWFQAGYFTMTLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPL
LVRQPPPTQRPQPTRGSAGTVSQSSANVEDGEGRMQRRGKLDRQVTGNLDQDRLKKQQEL
AAATALYQQLQQQQLFQLINRCSEQGMMPSMNRSMSVPDTGSMWDMHTSASQPSGGEASL
WDITMNPSTQGPTLEQLQKVASVLQQERRDAELRAKREEEEQRKRREEKRRLQEEQKRRE
EEELFRRKQCRQQQELIMKLLQHSPQQQGPGAGSSGWSGAPSSGLSKSGKPPALALLEMQ
QEAERLLKQQQQQQQRAQQQRERLSGMSMGSSSMGGQWADGVGMWGGPGGMEGKSSSGSS
SGSMGMWDEAVKNQASLRGNNNMGLKNSRSSPSLSDQFMMRRKRTEDEDKLLKLLQGMKP
QDGFTTWCEQMLHALNTSANNSSSPLDVATIVAYLKEMESPYAVLEFIRSYLGDTVEAKE
FAKQFLERRAKQKANQQRQQQQLSKEVAGLNMNFPLQDSMRGMNPSTLQSMFQANHMGKS
GLYDNQGGKMKKKQPMMLHPDPSILGYSFHNASECLSLNEMEMVEDY
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcaagatgagcccatgcagccactggcactggtg
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagtgtggcggtgcta
aggctcatgggaaaaggggtgggcgccacagccccagctggagtggtccgaggacgaggg
gcagcgcgaggtggtcgaggacgaggtcgcggtgaaggtggattttaccaaagaagtatt
gaagaaccggaggtgggtttcggacgcggcgtccgagagattcatcgcagccagagctgg
gatgaccgggctgagcgtagatttgagaagccgatccggcgggaggtcgggcgtcccggc
tttgaagagcctgtagtgcctgtggttccaggacggaaggatttcacaagggctgacagc
gataactggcgcatcctccgggaggagcagcaggaggaggaggaggaggcggcggcggca
ggtggggggggggtggtggtggtggagccgggaaccaactggagacttacaggagtccgc
agggatgatgggggtcctcgctcagcaggctggcgggaacacaccggtcccggcgagggt
cgccgtcggaagtttgatttcgatttcagggacgccgatggccatggtggtggccgccgg
cgtgagggactggacgacggagacggcctgcctgagtggtgcacagacgaggaggacggg
gagatgggcacgtttgactcctctggagctttcatggctttgaagaagggcgacaaggac
ataatcctggaggaggagtttgattttaaggggatagaggacgaggaagacgaggagttc
tacgctgacatggagaggaacagtgctgaagaagacaaggagagtaaagaagctggctct
gctgtcagggacgacgagacaaagccagcttcaccctcatcctctcctcctgcactgcaa
cactgtacccccccctctgtggagcatcggcccagcaacgcaggcctgttggtggacaat
gctcagctgaacaacagccaccccgtcaaagccagcagcgcgcccagcgagggtaccccc
tatttcacgtcagaagcaacagaccgatggattcagttggcagctctcttagacatggct
cctgtaggggtctctaagagccagctgagccccagcgcccccccttcctcccgcatgcct
cctccaccaccttcctctgctgctcctctccaccctccacctggaggggacacggaggac
gatgagggcatgaagcacctgcagcaggaggcagagaagatggtggcgtcactgcaggac
acttctctggaggaggagtgcttcacccaggctctgcagcagcagcaggagtgcaggaac
acagccgccgctctgccgctgtcacacgaggccgccatgaagtggttctacaaggaccca
cagggagagatccagggtcccttcaccacggtggagatgtgcgagtggttccaggccggc
tacttcaccatgaccctgctggtgaagcgtggctgcgacgagggcttccaacccctggga
gatgtcatcaaaatgtggggccgggtgcccttcgccccagggccctcccctccgcccctg
ctggtgagacagccaccaccgacgcagcgcccgcagcccacccgggggtccgccgggact
gtgagtcagagctctgccaacgtagaggatggggaggggaggatgcagaggagagggaag
cttgatagacaggttacggggaacctggaccaggaccgcctgaaaaagcaacaggagctg
gcggcagcaacagctctctatcagcagctccaacagcagcagctattccagctcattaat
aggtgcagtgagcagggtatgatgccttcgatgaacaggtcgatgtcagtgccagataca
gggtccatgtgggacatgcatacctcagcttcacagccgtcaggcggtgaagccagtctt
tgggacataacaatgaatccttctactcagggtccaactctcgaacagcttcaaaaggtg
gcttcagttctccagcaggagaggagagacgctgaactcagggcgaagcgtgaagaggag
gagcagcgtaagaggagggaggagaagaggaggcttcaggaggagcagaagaggagggag
gaagaggagctcttcagacgcaagcagtgtcgtcagcagcaggagctgatcatgaagttg
ctgcagcattccccccagcagcagggtcctggggcaggcagctcaggctggagcggggcc
ccctcctcagggctctccaagtcaggaaagccccctgctctggctctgctggagatgcag
caggaggcagagaggctcctgaagcagcagcagcagcagcagcagagagcccagcagcag
agggagcgcctctctggcatgtcgatggggagctcctccatgggcgggcagtgggcggat
ggtgttggcatgtggggcgggcctggagggatggagggcaagagcagcagtggaagctct
tcaggcagcatgggcatgtgggacgaggctgtgaagaaccaagccagcctgcgtggcaac
aacaacatgggcctgaagaacagccgcagcagcccctcactcagtgatcagttcatgatg
cgtaggaagcggactgaggacgaggacaagctgctgaagctgctgcagggcatgaagcct
caggacggcttcactacctggtgtgaacagatgctgcacgctctcaacacctctgccaac
aactcctcctccccactggatgttgccacaattgtggcctacctgaaggagatggagtct
ccctatgcagtgctggagttcatccggtcctacctaggggacacagtggaagccaaagag
ttcgccaaacagttcctggagcgacgtgccaaacagaaagccaaccaacagagacagcag
cagcagttatcaaaggaagtggctggattgaacatgaacttccctctgcaggactcaatg
cgaggaatgaatccaagcaccctgcagtccatgtttcaagctaaccacatgggcaagtct
ggtctctatgacaaccagggagggaagatgaagaagaaacagcccatgatgctgcaccct
gaccccagcatcttagggtactcattccacaacgcgagcgagtgtctgagcctgaatgag
atggagatggtggaggattactga
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integrated database retrieval system
