Pseudochaenichthys georgianus (South Georgia icefish): 117463812
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Entry
117463812 CDS
T09629
Symbol
cldn15a
Name
(RefSeq) claudin-15a
KO
K06087
claudin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03272
Virion - Hepatitis viruses
pgeo04382
Cornified envelope formation
pgeo04514
Cell adhesion molecule (CAM) interaction
pgeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117463812 (cldn15a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117463812 (cldn15a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117463812 (cldn15a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117463812 (cldn15a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117463812 (cldn15a)
04147 Exosome [BR:
pgeo04147
]
117463812 (cldn15a)
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117463812 (cldn15a)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117463812 (cldn15a)
Exosomal proteins of colorectal cancer cells
117463812 (cldn15a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
KRE1
DUF6771
Motif
Other DBs
NCBI-GeneID:
117463812
NCBI-ProteinID:
XP_033962170
LinkDB
All DBs
Position
18:complement(9294113..9297029)
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AA seq
222 aa
AA seq
DB search
MDPIVEVVALILGFIGWVMVGITLPNRYWRTSTVDGNVITTSTIYENLWMSCASDSTGVH
NCREFPSLLALNGYIQASRALMITSIVCGTFGLLLALIGVQCSKAGGENYVLKGRLAGTA
GVLFIFQGLCTLIAVSWYAFNITQEFFNPLHAGTRYEIGEGLYMGWCSAVLAIAGGACLT
CSCQMGTEEKYRLPYQAKGTVYSGPAPTRSVAASTYGRNAYV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggatccaattgtggaagtagtggcgttgattttggggttcattggttgggtgatggtt
gggatcacgctgcccaaccggtactggaggacctccaccgtggacgggaacgtcatcacc
acctccaccatctacgagaacctgtggatgtcatgtgccagcgattcaaccggggtccac
aactgcagggagttcccctcgctgctcgctttgaatggttacatccaagcgtcccgtgcg
ttgatgatcacatccatagtgtgtggcacctttggactgttgctagccctgataggagtg
cagtgctccaaggctggaggggaaaactatgttctcaaagggaggcttgctggcaccgct
ggagtccttttcatatttcaaggtctgtgcacgttgatcgcagtgtcttggtatgccttc
aacatcacacaggagttctttaaccctctgcacgccgggacaaggtatgaaataggagaa
ggactctacatgggatggtgctccgccgtgctcgccatcgccggaggagcctgtctcact
tgctcctgccaaatgggcacagaggaaaaataccggttgccctatcaagccaagggaacg
gtatactctggaccagcaccaaccaggagtgtggctgctagtacgtacggacgaaatgct
tacgtttga
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