Pseudochaenichthys georgianus (South Georgia icefish): 117463817
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Entry
117463817 CDS
T09629
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117463817
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117463817
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
SALM family
117463817
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117463817
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
fn3
Ig_2
LRR_9
LRRCT
Motif
Other DBs
NCBI-GeneID:
117463817
NCBI-ProteinID:
XP_033962176
LinkDB
All DBs
Position
18:complement(15791470..15825630)
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AA seq
1045 aa
AA seq
DB search
MPVPPPLNPCRQKHLPHTHPHPEQRAEHSPPLFPPSIPSLSFLPALLVSSLPSSSQLVHC
ACPRAPKRTLPESAPFPAFHWLSLVTCCLLPSLIGAGETWGMVSTCPFHCVCRNLSESLS
TLCADKGLLFVPVNVDRRTVELRLADNYITEVGGIDFANMSGLVDLTLSRNTINLIRPMT
FGDLESLRSLHLDGNRLIAVGPRDLAGLVNLQHLIINNNQLIKVSVQAFDDFLLTLEDLD
MSYNNLRRVPWESIQNMASLHTLNLDHNLIDFIAEGVFGELYKLARLDMTSNRLRTLPPD
PLFARSQTGAISPTPYNAITSLNFGGNPLHCNCELLWLRRLIRGDDMETCATPPHLAGRY
FWSIPEEEFTCEPPLITRHTHKLWVLEGQRATLKCRAIGDPEPVIHWVSPDDRIVANSSR
TSSFSNGTLDILVTVARDDGAYTCIAINAAGEATATVDLKIIPLPHRGGAGGNAGNNNVN
TKNAGNVTNGILRTDPGSSDISTGINGGINNGAGRGGEAEDGKKGGSEGDEGESSKASEG
ETANGGSMEDEEDEEERRVGVQGVTSTSAQVRWDLGSLSAVYAVWMYQIQYNCTADETLI
YRILPSTSDRFLLKNLVPGADYNLCVLAIFDDTITSLAATKVLGCATFSTKDVYPACRSL
HAHFLGGTLTILVGGVVVVTLLVFTVALMVRHRVCNHGDHMICHSGNTEAGGGACCQGGG
SGDKGGNSGGCYQSNGSGDVMMVVLPNGLPSKRGGEKDKEKDKEKEKEKEKEKEEADAAS
SLVPKPPPKPRPKPKVNLEQFLSAGGVVSMTTGASEMALVVRQRKLDKAPPYTPESDRTP
LYYSPSSTLPRLSHSRERPRPRLERELTTRASFSLAAPLGDSDLLDWRMSSRSRDKWNSS
QAYQSPLSPLSPACGTVSKRRHSLDMGSSVALATADAAATVAKRYVAGNYAKRLSVIWTR
RSQSLHGMLVQCGSTTSTTSSTTSDEESGVGYGAHCEFQRGYIHAYNTTNSNSNTGITAG
KAIKERGRLTGKDGRSAEELEESVV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtccccccacccctcaatccctgcagacaaaaacacctgccccacacacacccc
catcccgaacaaagggcagaacactcccctcccctcttccctccatccatcccctctctt
tcttttctccccgctctcctcgtctcatctttgccctcctcatcccagctcgtccactgc
gcgtgccccagggctccgaaaagaacacttcccgaatcggcccctttcccggcgttccat
tggctgtctctggtcacatgctgcctgctgccttcgctgattggagcaggggagacgtgg
ggcatggtctcgacctgtcccttccactgcgtgtgccgaaacctttccgagtcgctcagc
acgctctgcgccgacaagggcctcctttttgtccctgtgaacgttgaccggcgcaccgtg
gagctgcgactagccgacaactacatcacggaagtgggcgggattgactttgccaacatg
agcggattggtggatttgactctgtcgaggaataccatcaacctgatccgacccatgacc
tttggtgacctcgagagtctgcgctcactgcatctggacggtaatcgcttgatagcagtg
ggacccagggaccttgcagggttggtcaatctgcagcacctgatcatcaacaacaaccaa
ctgatcaaagtctccgtccaggccttcgacgacttcctgctcacactggaagacctcgac
atgtcctacaacaacctcaggagggtgccgtgggagtccattcagaacatggccagtctg
cacactctcaatctggaccataacctgatagacttcatagcggagggagtctttggagag
ctgtacaagcttgcaaggctggatatgacctccaacaggctccgcactctgcctccagat
cccctattcgcaaggtcccagacaggtgcaataagtcccaccccgtacaatgctatcact
agcttaaattttggtgggaacccgttgcactgcaattgcgagctgctatggttacggagg
ctaatccgcggggacgacatggagacgtgtgccacacctcctcacctggctggaagatat
ttctggtcgattcctgaggaggagtttacctgtgaaccaccgctgatcactcgtcacact
cacaagctgtgggtgctggagggccagagagccacgctcaaatgccgtgccattggtgac
ccagagccagtaatccactgggtttcccccgacgaccgcatcgttgccaattcatcccgg
accagctccttcagcaatgggaccttggatatcttagtaacagtggcccgcgatgacggg
gcgtacacgtgtattgcaataaacgcagcgggtgaggcaactgccactgtggacctgaaa
ataatccccctgcctcaccgcggcggagcaggtggaaacgcagggaataataacgtgaac
accaaaaacgccgggaacgtgaccaatgggattttacggaccgatccgggctcttctgat
atcagcacaggtataaacggagggattaacaatggagcaggacgaggaggggaggcagag
gacggaaagaaaggtggaagtgagggcgatgagggcgaaagtagcaaggcctctgaaggg
gagacggccaatggagggagcatggaggacgaggaggacgaggaagaaaggagggttgga
gtacaaggagttacgtcaacctcagctcaggtccgatgggatttgggaagtttgtctgca
gtttacgcagtctggatgtatcagatacagtacaactgcaccgccgacgagaccctcatc
tacagaatcctaccatcgaccagtgatcgcttcctgttgaagaacttggttcccggtgcg
gactataacctgtgtgtgctggccattttcgatgacacaatcacatcactagcggcgaca
aaagtcctgggctgcgccacgttctccactaaggatgtttacccagcatgccgctctcta
catgcccatttcctgggcgggacgctcaccatattggttggcggtgtggttgtcgtcacc
ctgctcgtgtttaccgtcgcgctcatggttcgccaccgcgtttgcaatcatggcgaccac
atgatatgtcacagcgggaacacagaggcggggggaggggcctgctgtcagggtggaggg
agcggggacaaagggggaaacagtggtgggtgctaccaatcgaatggatctggggacgtg
atgatggtggtcctgcccaatgggctgccgtccaagagaggaggggagaaggacaaggag
aaggacaaggagaaggagaaggagaaggagaaagagaaggaagaggctgatgctgcttcc
tctctggtgccaaaaccccctccaaagcccaggccaaagccgaaagtcaacctggagcag
tttctttcagccgggggggtagtttccatgacaacaggggcaagtgagatggcattggtg
gtcaggcaaagaaagctggacaaggcgccgccatacacgccggaaagtgacagaactccc
ctttactattccccttcctccaccctgccccgactgtcccactcgagggagcgcccaagg
ccccgtctggagcgagaactcaccactcgggccagtttctctctggcggcccccctggga
gactcagatctgttggactggagaatgagttcccgcagccgggacaaatggaactcctcg
caggcttaccagagccctctgtccccgctaagccccgcctgcgggaccgtcagcaaacgg
cggcactcgctggacatgggctcctctgtcgccctagcaactgctgatgcagccgcgaca
gttgccaagcgctatgttgctggtaattatgccaagcgtctgagcgtgatatggacgcgg
cggagccagtctctccatgggatgcttgtgcagtgcggctcaacgacaagcacgacttcc
tcgacgaccagcgacgaggagagcggcgtgggctacggagcgcactgcgagttccagagg
gggtatatccacgcttacaacaccacgaactccaactctaacactgggatcactgccggg
aaagcgatcaaagaaagggggaggcttacggggaaggacggaaggagtgctgaagaactt
gaggaaagtgttgtgtag
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