Pseudochaenichthys georgianus (South Georgia icefish): 117463935
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Entry
117463935 CDS
T09629
Symbol
dtx4a
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4a isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117463935 (dtx4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117463935 (dtx4a)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117463935 (dtx4a)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117463935 (dtx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-UDP
zf-RING_Vps41
PHD
Motif
Other DBs
NCBI-GeneID:
117463935
NCBI-ProteinID:
XP_033962346
LinkDB
All DBs
Position
18:6433399..6447531
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AA seq
767 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVCHHIEAVIRSDPRCGSVVLGQVDSRLSPYIIDLH
SMHQFRQDTGTLRPVRRSFYDPTLAPGQGWLWEWENDAGSWTAYDTEVGIAIQTARDRQQ
PWLDLAPLGFCYLIDFESMTQINGQTQRCRRIQRRSDLAYPLVAGPLPKSHHAWGPMAMP
SHGGLLGVDVSGVGMGIRMSNSGTGNGSAYPSGALPASAITSLGQPCACQQCMLVLSVKA
GAMSAHTLGRRPPQTKPPSPKMSYPVQGGSYSLTLPRPPSLSRSFSPHRTSIIGATGGYT
LGGAGGVGTVGGGGYGSASFGYGGGFTHSLSLLGSATAALSLHSTRPPPPPLPPPPPPPP
PPSITLSSSATSTPHPSTSSSFSILSSAPTVPSLGPPLISTAASTCTPSPSARVLGPVSS
SGAAACAAPLPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAG
ITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPIPGLGHCCRKTTKKQARKGKTPEEV
VKRYLQKVRNPPEEDCTICMEALAGPSGYKGPGVGGISRAESVGRLAQCGHQYHLQCLVA
MYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGI
QGPEHPNPGKPFTARGFPRHCYLPDSEKGRRVLRLLLVAWDRRLIFSVGTSSTTGESDTV
IWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELKAQGITEEECLSRD
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgttactagcatccgccgtagtggtatgggaatggctgaacgagcacggtcgctggcgg
ccctacagcccggctgtctgtcatcacatcgaggcagtcatccggagcgacccgcggtgt
ggtagtgttgtcctcggccaggtggactctcgcctctcgccctacatcatcgatttgcat
tccatgcaccagttccgacaagacacaggtacccttcgaccggtacgacgtagcttctac
gaccccaccttggcgcctggccagggctggttgtgggagtgggagaacgacgctggcagt
tggacggcgtacgacacggaggtgggcatcgccatccagaccgcgcgcgaccgccagcag
ccctggctggacctggcgccgctgggtttctgctacctcattgacttcgaaagcatgacc
caaatcaacgggcagacgcaacgctgccgacgcatccagcgacgctcagacttggcgtac
ccgctggttgccgggcccttacccaaatcccaccatgcctgggggcccatggccatgccc
agccatggaggactgcttggggtggatgtatccggagtgggcatggggatccgcatgagc
aacagtgggactggaaatgggagcgcgtaccccagtggggcgctccctgcctccgccatc
acctctttaggacagccctgcgcctgtcagcagtgcatgctggtgctgagtgtcaaagcg
ggcgccatgtctgctcacactcttgggcggagacctccacagaccaagccacctagtccc
aaaatgagctaccccgtccaaggagggtcgtactcactcactctccctcgacctccttcc
ctgtcgcggtccttctccccccacaggacgtccataattggtgcgacaggtggctacact
ctgggtggagcaggaggtgtagggacggttggtggcggtggttatggcagtgccagcttc
ggttacggaggaggcttcacccactctctttccctcctcggctcagccaccgccgccctc
tccctccactccacccgcccccctcctccacctctcccccctcctcctcctcctcctccc
ccgccctccatcacactctcatcttctgccacctcaacccctcacccttccacctcgtcc
tccttctctattttgagctccgcccctacagtgccctccctaggtccacctctcatctcc
acggccgcctccacctgcacgccctcgccttcggcccgcgtcctgggcccggtgtcttca
tctggtgccgctgcctgcgcggcccccctgcccccccggtccagcctcgccgggctgagc
cgacctgcactgcagcgaatcgccatggctcagtcacgtgcccttatcgcctctggagtg
ccaactgttcctgtaaagaacctgaacggatcaagcccggtacaccctgcactagcaggc
attacaggcatccttatgagcgctgcaggacttcctgtctgcctgacccgccctcccaag
ctagtgcttcatcctccacccgtcagcaagagtgacatcaagcccatccccggcctgggc
cactgctgccgcaagaccaccaagaagcaggctcgaaaaggaaagacccctgaggaggtg
gtgaagaggtaccttcagaaagtccgcaatcccccagaggaagactgcaccatctgcatg
gaggccctggccggaccctcgggctacaaaggccccggggtggggggcatctcacgggcc
gagtcggtgggccgcctggctcagtgcggtcaccagtaccacctccaatgcctcgttgcg
atgtacaacaatggcaacaaggacggcagcttgcagtgtcccacctgtaagaccatctac
ggagtcaagaccggcaaccagcccccgggcaagatggagtaccacgtcatcccccactcg
ctacccggacacccggactgcaaaaccatccggataatttacaacatccctcctggcatc
cagggccccgagcacccgaatccaggcaaacccttcactgcccgcgggttccccagacac
tgctacctccctgacagcgagaagggacgcagggtgttgaggcttctcctggtagcgtgg
gaccgccggctcattttctctgtgggtacatcgagcaccacgggcgagtcagacacagtc
atctggaacgaggtgcaccacaagacggagttcggctccaacctaacgggccacggctac
cccgaccccggccacctggacaacgttctggaggagctcaaggcccagggcatcacggag
gaggagtgcctgtccagagactga
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