Pseudochaenichthys georgianus (South Georgia icefish): 117463969
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Entry
117463969 CDS
T09629
Symbol
cyld3
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04217
Necroptosis
pgeo04622
RIG-I-like receptor signaling pathway
pgeo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117463969 (cyld3)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117463969 (cyld3)
04625 C-type lectin receptor signaling pathway
117463969 (cyld3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117463969 (cyld3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117463969 (cyld3)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117463969 (cyld3)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C67
117463969 (cyld3)
Ubiquitin system [BR:
pgeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117463969 (cyld3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
EAD8
Motif
Other DBs
NCBI-GeneID:
117463969
NCBI-ProteinID:
XP_033962388
LinkDB
All DBs
Position
18:4168522..4186336
Genome browser
AA seq
1007 aa
AA seq
DB search
MKLYNGLNSFVNPAIEKDTQKMSGAHEQTRKRRPPKMFLISTDLKVQDQLDGTIKLLRGF
ICQEQEAGRSRGDSYWVKVLDNDFMLKIEKKFLLEVPSDLSGLLEAVSDPEARLKLLRDP
GKLQTCASLPVDSPLWVQIGQQDELAQADLKYIGPRSRGSSAVYFGVQLKGSAAGKGSSN
GSFKDQRLFSCPEACALFLPVSHVHIRTWTHNNVQDAQERAKERDRHRSSHGNGQRGNGQ
HGNGQHNNERQHPQHQGRHISFHHPRPSSPPVGFLPRTAESAPITAQNQNQVRAPASPPP
LHVGQRVMFPIEDNVYGGEVCFCGLLPGRSSSGMYVGILLDAPVGQWDGLYKGEKLCNIP
SPLHGALVPINKVSSDSKPHHHTPPHQVTKSILKPAPPPIKPLPLSAPHSAPKVALMPPG
KQGVKVPPLPPPKPNNKPLLPPLTAPKPLSPTSPTFTPTHTPTHTSPEHPHHNGVHGPPS
PSLRSPVSSEAVEEDGEAGLDGGLEVGSMVEVNDPPLFGVIHWIGRISGVGEPVAGIELD
QDLSAGTDGSYLGERHFRCPANKGLFVKLRNCRRDSRFPAPETPVNQVERCNSIAFAEWG
SERVEDNSPPVEGEEAVELYEGWKRGIQGHLNSCYLDATLFSLFSCCSSADWVLFWPSDP
DSDSSLAQDLLRCEIVNPLRRYGYVCASKTMALRRLLEAANSNMGFTNQEKDPEEFLNKL
FQLLQVEPLLKIRSMTRQPQEGHLYQLFPPTLPPSPTSPLLVSPIGSPIPLAPPSPSRMR
VASVQTLLESSFLHAGLKFVEAPSCLLLLMPRFGKDFKMFDAILPTLSLDITDLLDDTLR
QCSICQAVAEWECLQCYEDPDITPGRLKQYCSTCNTQVHSHRKRASHHPVDVAVPGGPWT
GPLLSARQRMSLFAVTCIETSHYVSFVKHGPLPTDWMFFDSMADREGEQNGFNIPHVKAC
PEVGRFLSLPEQELSRVDPASIRESARRLLCDSYMCLYHSPDLSLYK
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatataatggacttaattccttcgtgaacccggctatagaaaaagacacgcag
aagatgtcaggggctcatgagcaaaccaggaagcgacgccccccaaaaatgttcttgatc
tcgaccgacctgaaggttcaggatcagctggacggaaccattaagctgctgcgggggttc
atctgccaggagcaagaggcgggccggagcagaggcgacagctactgggtcaaggtgtta
gacaatgacttcatgttgaaaatagagaagaagttcctgctggaagtcccgtccgacctc
agcggcctgctggaggctgtttctgatcctgaggcccgactaaagcttctaagagatcct
gggaagctgcagacttgtgcgtctctgcccgttgattctccgctctgggtccagatcggc
caacaggatgagctggcacaggcagaccttaaatacatcgggccgcgctcaagggggagc
agcgctgtgtattttggggtacagctgaagggctcagccgccggtaaagggtcgagcaac
ggctccttcaaggaccagcggctcttcagctgccctgaagcctgcgccctcttcctgccc
gtcagccatgtgcacatccgaacctggacccacaacaacgtgcaggacgctcaggagcga
gccaaggagcgagaccgccaccgcagcagccacggcaacgggcaacgcggcaacgggcaa
cacggcaacgggcaacacaacaacgagcggcagcatcctcagcatcaaggtcgtcacatc
agtttccatcaccctcgccccagcagcccccccgtgggtttcctccctcggacagcagag
tcagcaccaatcacggctcagaaccagaaccaggtccgagcccctgcatcccctcctccg
ctccatgtgggccagagggtgatgttccccatagaggacaacgtctacgggggggaagtt
tgtttctgtggtcttctgccgggtcgctcctcctcagggatgtacgtgggaattctgctg
gacgctcctgtgggacagtgggacggtctttataaaggagaaaagctctgcaacattccc
tctccgctccacggagcattagtgcccatcaacaaggtttcctcagattcgaaaccccac
catcacacccctcctcaccaagtgaccaaatccatcctgaagccggcgcccccccccatt
aagcccctccccctgtcggccccccactctgcgcccaaagtcgccctgatgccccccgga
aaacaaggggttaaagttcctccactgccgcccccaaaacccaacaacaagccgcttctt
ccccctctgaccgctcccaaacccctcagcccaacgtcacccaccttcacccccacacac
acccccacacacacctcccctgaacacccccatcacaacggcgttcacggccccccctcc
ccctcgctgaggtctccggtcagcagtgaggctgtggaggaggatggagaggcggggctc
gacggggggctggaggtggggtccatggtggaagtgaacgacccgcccctttttggggtc
attcactggattggacgcatcagtggggtgggagagccggtggcagggatcgagctggac
caggatctgtctgcagggacagacggcagttacctgggtgaacgtcacttccgttgcccc
gccaacaaggggctgtttgtgaagcttcgcaactgcaggcgggactccagattccccgcc
cccgagacacctgtcaatcaagtggagcgatgcaactctatagcgtttgcagagtggggc
agtgagcgtgtggaggacaactccccccctgtggagggggaggaggccgttgagctctac
gagggctggaagagaggcattcagggacacctcaactcctgctacctggacgccacgctg
ttcagtctgttctcctgctgcagttctgcagactgggttctgttctggccctcggacccc
gacagcgactccagcctggctcaggacctgctgcgctgcgagatcgtgaacccgctgaga
aggtatggctacgtgtgtgccagcaagacgatggccctgcggcgactgctggaggccgcc
aacagcaacatgggcttcaccaaccaggagaaagatcctgaagagttcctcaacaagctt
ttccagctcctccaagtcgagccactcctcaagatcagatcgatgactcggcagcctcag
gagggccacctgtaccagctcttcccgccgacacttcctccttctcccacctcaccttta
ctcgtctcccccatcggctcccccatccctctggccccgccctcgcccagtcggatgaga
gtagcgagcgtccagacgctgctggagtcttccttcctccacgctggcctcaagttcgtc
gaggctccctcttgcctcttactgctcatgcctcgctttggaaaggacttcaaaatgttt
gacgccatcctccccacgctcagcctggacatcacagacctgctggacgacactctgagg
cagtgcagtatctgtcaggctgtggctgagtgggagtgtctgcagtgttacgaagacccc
gacatcacccccgggcgtctcaaacagtactgcagcacctgcaacacacaggtccacagt
cacaggaagcgtgcgtcccaccaccctgtagatgttgctgtccccgggggtccgtggacc
ggccccctgctgagcgcccggcagcggatgtctctctttgcggtgacgtgcatcgagacc
agccattatgttagcttcgtcaaacacggacccctccccaccgactggatgttttttgac
agtatggcagaccgggaaggtgagcagaacggcttcaacatcccccatgtgaaggcgtgt
ccggaggtgggccgcttcctcagcctaccagagcaggagctgagcagagttgatcccgcc
tccatacgggagtcggcccgccggctgctgtgtgactcctacatgtgtctgtaccacagc
cccgatctcagcctgtacaagtga
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