Pseudochaenichthys georgianus (South Georgia icefish): 117464054
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Entry
117464054 CDS
T09629
Name
(RefSeq) uncharacterized protein
KO
K10785
T-cell receptor beta chain V region
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04514
Cell adhesion molecule (CAM) interaction
pgeo04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117464054
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117464054
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117464054
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Gene cluster
GFIT
Motif
Pfam:
C1-set
V-set
Ig_3
Ig_2
I-set
ig
Motif
Other DBs
NCBI-GeneID:
117464054
NCBI-ProteinID:
XP_033962472
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Position
18:7288073..7313928
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AA seq
410 aa
AA seq
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MFLTVLHLLLLLHSGLTAVVLQSGDQMSQPGSKVTFECRMGGGLGMSSYTMLWYRQDRPG
AAVQFLTKEYDQAAGNKVSSIVPSKNTFSLHISELQLSDSSTYYCAAKHSAALRAETRTD
NRPLQLELGLSGFICSPYNHAAHGPSDRVAAHDPSDRVAAHGPSDRVAAHDPSDRVAAHG
PSDRVAAHGPSDRVAAHVFLHCDSGNEAYFGKGTKLTVLEPGRNVSAPTVTVFPPSANEC
RNQRDRERRKTLVCVASGFYPDHVSVSWQVGGGAVSSGVATDSSALREGKTYRISSRLRV
SASDWFTPDRKFTCRVSFFNGTHTSHHENTVEGVQGKEGVMTREKYLKTTQAAKLSYVVF
IVKSSVYGAGVAFLLWRLQANNSFKKTIPLKERNQTCPVVVRESAEGSIH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcacagtccttcacttgttgcttcttttacactcaggtctcactgcggtggtc
cttcagtctggagatcagatgtcccagcctgggtccaaagtgacctttgagtgcaggatg
ggtggtgggctgggtatgagcagctacaccatgctctggtaccggcaggaccgccctgga
gctgcagtgcagttcctcactaaagagtacgaccaggctgcaggaaacaaagtgtcctct
atcgttccgtccaaaaacaccttctctctgcacatcagtgagctgcaactgagcgacagc
agcacgtactactgtgctgccaaacacagtgctgcactaagagcagaaacccgtacagat
aacaggccgctgcagctggagttaggcttatctggttttatctgcagcccctataaccat
gccgcccacggcccctcagaccgcgtggccgcccacgacccctcagaccgcgtggccgcc
cacggcccctcagaccgtgtggccgcccacgacccctcagaccgtgtggccgcccacggc
ccctcagaccgtgtggccgcccacggcccctcagaccgcgtggccgcccacgtatttctg
cactgtgactctggaaacgaggcttactttggaaaaggaaccaaactgacggttttggaa
ccaggccgtaatgtctctgccccgacagtcacagtgttccctccgtcagcaaacgagtgc
aggaaccagagagaccgtgagaggaggaagaccctggtgtgtgtggccagcggattctac
ccggaccacgtcagtgtgtcctggcaggtgggcgggggggccgtcagcagcggggtggcc
accgacagcagcgccctgcgggaaggcaagacctacaggatcagcagcaggctgagggtc
tcggcctcagactggttcacaccggaccggaagttcacctgcagggtcagcttcttcaac
gggactcacaccagccaccatgaaaacacggtggagggggtccaaggcaaagaaggagtc
atgacaagagagaaatacttgaagacgacccaggcggccaaactgtcgtacgttgtgttc
atcgtgaagagcagcgtctacggtgccggcgtggccttcctgctgtggaggctgcaggcc
aacaacagcttcaaaaaaactattcccctcaaagagagaaaccaaacatgccctgttgtc
gtgagagaaagtgcagaaggaagcatccattaa
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