Pseudochaenichthys georgianus (South Georgia icefish): 117464358
Help
Entry
117464358 CDS
T09629
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117464358 (rhbdl1)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
117464358 (rhbdl1)
Peptidases and inhibitors [BR:
pgeo01002
]
Serine peptidases
Family S54: Rhomboid family
117464358 (rhbdl1)
BRITE hierarchy
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580_M
DUF5580
Motif
Other DBs
NCBI-GeneID:
117464358
NCBI-ProteinID:
XP_033962626
EnsemblRapid:
ENSPGEG00000011702
LinkDB
All DBs
Position
19:22243286..22289337
Genome browser
AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLLALVQSNEEGQVCY
QELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGLYKRFVRYVAYEILPCETDRRW
YFHQNRLCPPPVFIAIVTIVQIIVFMCYGIMLNKWVLQTYQPDFMKSPLVYHPGHRAQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVLAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLSGAVVGISMGLLILRSYEESLQKQCSWWVIVFSFITFLLFAIFWNIFA
YELLGVQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctccctgtttcagctcatacaagagcagctggacccagacaacaccggt
ttcatcgcagtggagaacttcaccagcttggtggagcaccatgagctgcagctggacccg
tccaaactggacatgctgttagcgctggtccagagcaatgaggaggggcaggtgtgctac
caggagctcatcgagctgatgagcagtaagcgctccagcagtttccgacgggccatagct
aatggccgccgcacgctgcagagggagatcctgctggacgagacggggctgggtctgtac
aaacgcttcgtccgctatgtggcctacgagatcctgccctgcgagacggaccggcgctgg
tacttccaccagaaccgcctgtgtcccccgccggtcttcatcgccatcgtcaccatcgta
cagatcatcgtgttcatgtgctacggcatcatgctgaacaagtgggttctgcagacctac
cagcccgacttcatgaagagtcctctggtctaccaccccggacaccgagctcaagtgtgg
cgcttcttcagctacatgttcatgcacgttggtttggagcagctggggttcaatgcttta
ctgcagctgatgattggcgttcctttggagatggtccatggcatattacggataagtctt
ctatacatggcaggagtgctggccggctcgctcacagtgtccatcaccgacatgcgagct
ccggtggtgggggggtccggaggggtctacgctctgtgctcggcacatctggccaacgtc
gtcatgaactgggccgggatgcgttgtccgtacaagctgctccgcatgatcctggctctg
gtttgcatgagttcggaggtgggtcgtgccgtctggctccgcttctcccccccgctgccc
tcctcggggccccagcccagcttcatggcccacctgtcgggggccgtagtgggcatcagc
atggggctgctgatcctgcgcagctacgaggagagcctgcagaaacagtgctcctggtgg
gtcatcgtcttctccttcatcaccttcctcctcttcgccatcttctggaacatctttgcc
tatgagctgctgggggtgcagatcccgcctcctccctga
DBGET
integrated database retrieval system
