Pseudochaenichthys georgianus (South Georgia icefish): 117464409
Help
Entry
117464409 CDS
T09629
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117464409 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgeo03009
]
117464409 (efl1)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
Pre-60S particles
GTPases
117464409 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117464409
NCBI-ProteinID:
XP_033962713
LinkDB
All DBs
Position
3:4476950..4613816
Genome browser
AA seq
1135 aa
AA seq
DB search
MAPTSLDRIVALQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISNRLAGKLRYLDSR
EDEQIRGITMKSSAISLHHRNGDQDYLLNLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLILELKLSSQEAFIHLQKILEQVNAVTGSL
FTSKVLEERAEKEKKKKEDEKNEKEVETLTRDQVYDWSAGLEEADDSQLYFSPDQGNVVF
ASAIDGWGFSIQQFAHIYSQKMGIKAEVLLKTLWGDYYLNAKAKRIMKGAQAKGKKPLFV
QLVLDNIWSLYDAVVTRRDKDKVEKVVSSLGVKLMSRDSRHSDPKVLLSAICSQWLPVSQ
AVLAMVCEKLPSPLDITEERVEKLMSVGARIFESLPEQTQELKRAFLRCGSEEDDPLIIF
VSKMFVVDNKALPKNRQRPLTHEEIAQRRDLARQRHAEKLAADQTAAENPSAPPISGSMP
QEGQPAEVSTAKMESLTLNDSKPQEEEEQQTFMAFARIYSGVVKKGQRVFVLGPKYDPAK
GLSMLPVGCMASDCVPEVPHMSCCSMESLYLLMGRDLEELQQVPAGNVLGIGGLEECVLK
SATLSTSPACPPFIPLNMEAMPIVRVAIEPKHPSDMPKLVRGMRLLNQADPCAEVLIQET
GEHVLVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVVRPPKVDMVNEELGHQHK
VAIHRVKEEAPQGRSSDTLHVDPSGLVTLTTPNRLASVSVRAAPLPQDVTSLLESSTELI
RTLEQVNMSLREGRSVDVSPRTLEAIAGFKAQLESLLQGRRWRSAVEHIWAFGPRRYGPN
ILLNSVEGYQRPSVWQCLCRGGPPEAGAQTAFTRDLDNSIVSGFQLATLSGPMCEEPLMG
VCFSLERWDVQSSAPPQHQDSVEEASVSHEAPADCKVQGSSETPAKAEGPVSGPSQARRR
PEAPPPGCYGPVSGQLIAAMKEACRHAFQAQPQRLMAAMYTCEIMATAEVLGRVYGVLGK
REGRVLHEEMKEGTDMFLIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSDPY
WVPTTEEEYLHFGEKADSANQALKYTNAVRRRKGLYVEGKTVEHAEKQRTLGKNK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaccagcctggacaggatcgtcgctctgcagaggaaccctgcgaacatccgg
aacctgtgcatcctggcccatgtggaccatggtaaaaccactctggctgactgcttggtg
gcgagtaacggaatcatatccaatcgactggccgggaagctgaggtatctggacagcaga
gaggatgaacagatcagaggaatcaccatgaagtccagtgccatctctctgcaccacagg
aacggagatcaggactacttgctgaacctgatcgactctcctggtcacgtggacttctcc
tcagaagtgtccactgctgtccggctgtgtgacggggccatcgtggtggtggatgctgtg
gagggagtgtgtccacagacccaggtggtactgcgtcaggcctggctggaaaacatcagg
cctgttctggtcatcaataagatcgaccgcctcatcctggagctgaagctgtcctctcag
gaagctttcatccacctgcagaagatcctggaacaggtgaacgcagtgacagggtctttg
ttcacatccaaagtactggaggagcgagcggagaaagagaagaagaagaaagaggatgag
aagaatgagaaggaggtggagacgctgactagagatcaggtgtatgactggagtgccggg
ctggaggaggcagacgactcccagctctacttttctcctgaccaaggaaacgtggtgttt
gccagcgccatcgacgggtggggcttcagcatccagcagtttgcccacatctacagccag
aagatgggtattaaagccgaggtgctgctcaaaaccctgtggggggactactacctcaac
gctaaagcaaagaggatcatgaaaggagctcaggccaaagggaagaagcctctgtttgtg
cagctggtgctggacaacatttggagtttgtatgatgctgtggtcaccaggagagacaag
gacaaggtggagaaggtggtgtcctctctgggggtgaagttgatgtccagggactcccgg
cactctgaccccaaagtcctgctgtctgccatctgcagccagtggttacctgtgtcccag
gctgtcctcgcaatggtgtgtgagaagctccccagtcccttagacatcactgaggagcgg
gtggagaaactgatgagtgtcggagcgcggatatttgagtctctgcccgagcagacgcaa
gaactgaaaagagcgttcctccggtgtggaagtgaggaggatgatccactcatcatcttt
gtgtccaagatgttcgttgtggacaacaaggccttgcctaagaacagacaaaggccgttg
acacacgaggagattgcacagcgcagagatctggcgagacagagacatgctgaaaaactg
gcagctgatcagacggcagcagagaacccctcagccccccccatctcagggagcatgcca
caggaaggccagcctgcagaagtcagcacagccaagatggagagtttgaccctgaacgac
tcaaagccacaggaggaagaggagcagcagaccttcatggcgtttgcacggatctacagc
ggggtggtgaagaaaggacagagagtgttcgtgctgggaccgaagtacgaccccgccaag
ggcctgagcatgctgccggtgggctgcatggcctcagactgtgttcctgaggtccctcac
atgagctgctgctccatggagagcctgtacctgctgatgggccgagacctggaggagctg
cagcaggtgcctgccgggaacgtgctgggtatcggaggtctggaggagtgcgtcttgaag
tcagccaccctgtccacctcccctgcctgcccccccttcatccctctcaacatggaggcc
atgcccatcgtacgggtggccatagagcccaaacaccccagtgacatgccaaagctggtg
cgtgggatgcgtctgttgaaccaggctgacccttgtgctgaggttctgatccaggagaca
ggggaacatgtactggtcactgctggggaggttcacctgcagcgctgcctggacgacctc
agagaacggtttgctaaaattgagatcagcgcgtccaagcccatcattcccttcagagaa
acagtggtgcggcccccgaaagtggacatggtgaatgaagagctgggccatcagcacaaa
gtggccatccaccgggtgaaagaagaggcccctcagggacgttcctctgacacgctccat
gtggaccccagtggtctggtgaccctcaccacccccaaccggctggcctccgtcagcgtg
cgggccgcccccctgccccaggatgtgacgtctctgttggagagcagcacggagctcatc
cgcactctggagcaggtgaacatgtccctgagggaggggaggagtgtggacgtcagcccc
cggactctggaggccatcgctggtttcaaagcccagctggagagcctgctgcagggccgg
aggtggaggagcgctgtggagcacatctgggccttcggaccccgcagatatggtcccaac
atcctgctgaacagtgtggagggctaccagcggccctccgtgtggcagtgtctgtgtcgg
ggcggcccccctgaggccggagctcagaccgccttcactcgagatttagacaacagcatc
gttagcggcttccaactggcaaccctgtcagggcccatgtgcgaggagccgctgatgggg
gtctgcttctccctggagaggtgggacgtccagtcctcagcccccccacaacatcaggac
tctgtggaggaggcctccgtatcccatgaggctccagctgactgtaaagtgcaggggagc
agtgagacccccgccaaggcggagggcccggtgtcagggcccagccaggccaggcgcaga
ccggaggcccccccccccggctgctacgggccggtttccggtcagctgatcgccgccatg
aaggaagcgtgccgccacgccttccaggcccagccgcagagactcatggccgccatgtac
acctgtgagatcatggccaccgccgaggtgctgggcagggtgtacggggtgctggggaag
cgtgagggccgggtcctgcatgaggagatgaaggaggggacggacatgttcctcatcaag
gccgtgctgcccgtcgctgagagcttcggattcgctgacgagatccgcaagaggacgagc
ggattggccagcccacagctggtcttcagccactgggaggtgatcagcagcgatccgtac
tgggttcccaccacagaagaagagtacctgcacttcggggagaaagcagactctgctaac
caggccctgaagtacaccaacgctgtgcgccgccgcaagggtctctacgtggaggggaag
accgtggagcacgcagagaagcagagaactctgggcaagaacaagtag
DBGET
integrated database retrieval system
