Pseudochaenichthys georgianus (South Georgia icefish): 117464457
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Entry
117464457 CDS
T09629
Symbol
epas1a
Name
(RefSeq) endothelial PAS domain-containing protein 1 isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04137
Mitophagy - animal
pgeo04140
Autophagy - animal
pgeo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117464457 (epas1a)
04137 Mitophagy - animal
117464457 (epas1a)
04148 Efferocytosis
117464457 (epas1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117464457 (epas1a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117464457 (epas1a)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
bHLH_HIF1A
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
117464457
NCBI-ProteinID:
XP_033962793
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Position
19:complement(14527817..14533500)
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AA seq
381 aa
AA seq
DB search
MTADKEKRRAISREAARRRRRVESEVFEDLSRLLPLQQSVRDHLDKPSVIRLTLSYIRMH
TLLTGKTGTKAEASHKVKCGQVTDGQMVRHEFNGGCGEEEEKEKYDADASEETNMYLRIL
EGFLMVLSTEGDMIYLSENVSKYMGLTQAELMGHNIFEFSHPCDHEELRNNLRVTAEEVW
SGEKRDFVMRIKSALTHRGRSANLKSATWKVLHCQGRSKVCVAPSSVSCLLLTCQPLPLS
HTLLSTQTFTSQHSMDMRFTYCDQRMTLLLGYSTEELLGRSIYDLCHTRDTNCLTKNHFN
LCFKSQSVSGRYRMLVRGGGYVWVESHSAVIPNAHSSKSRPGANQPLCILCVTYVLRCVC
GLWFKATFTVSTHFIELYLSK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgacaaggagaagagaagggcgatcagccgggaggcggccagacggaggcga
cgggtggaatctgaggtgtttgaagatttgtctcgcctcctgccgctccaacagtctgtc
cgagatcaccttgacaagccctcagtgatccgcctcactctcagctacatccgcatgcac
acactgctcacagggaagacagggaccaaagcagaggctagtcacaaagtaaaatgtgga
caggtgacagatggtcaaatggttcggcatgagttcaacggaggatgtggcgaggaagag
gaaaaagaaaagtatgatgcagatgcctcggaagagacaaacatgtacctgaggatcctg
gagggatttctgatggtcttgtccacagagggagacatgatctacctgtctgagaacgtc
agcaagtacatgggcttgacacaggctgagctgatgggacacaatatttttgagttttcc
cacccctgtgaccacgaagaactcagaaataatctacgtgtaacagcagaggaagtttgg
agcggtgaaaagagggactttgtcatgaggataaaaagcgctctgacacacagaggaaga
agcgccaacctcaagtcagctacgtggaaggttctccactgtcagggccgatccaaggtg
tgtgtcgccccgtcttcagtctcctgccttctgctgacctgccagcctctgcccctctcg
cacacactcctcagcacacagaccttcaccagccagcacagcatggacatgaggttcaca
tactgtgaccagagaatgactctgcttctaggttacagcactgaggagctgcttggccgc
tccatctatgatctctgccacacacgggacacaaactgtttgaccaaaaatcatttcaac
ttgtgttttaagagtcagtcggtcagcggtcggtacaggatgctggtgagaggtggaggt
tatgtctgggtggagagtcacagcgccgtcatccccaacgctcactcctccaagtccagg
cccggcgccaaccagccactgtgcatcctctgtgtcacctatgtcctcaggtgtgtgtgt
ggcctctggtttaaagctactttcacagtttcaactcactttatagagctatatctatct
aaataa
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