Pseudochaenichthys georgianus (South Georgia icefish): 117464636
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Entry
117464636 CDS
T09629
Symbol
calcoco2
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 2 isoform X1
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04137
Mitophagy - animal
pgeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117464636 (calcoco2)
04137 Mitophagy - animal
117464636 (calcoco2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117464636 (calcoco2)
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117464636 (calcoco2)
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Xenophagy
Cargo receptors
117464636 (calcoco2)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
117464636 (calcoco2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
CENP-F_leu_zip
LAMB4
zf-C2H2_4
TMF_DNA_bd
CCDC39
DUF7121
GAS
Motif
Other DBs
NCBI-GeneID:
117464636
NCBI-ProteinID:
XP_033963057
LinkDB
All DBs
Position
19:complement(8834516..8843165)
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AA seq
608 aa
AA seq
DB search
MENPAEAEGRNPHTFSQVVFTDTPYSYPPSIPGITCCYTLTAAFQPNPRDWVGIFKVGWS
STKDYHTFVWVEPSLDVVGQESANRQAYFKEYYLPKDEVEFYQFCYVNSTGNVRGASTPF
CFRSPEEQSMEGSVDDDLLVITTQEQLEKGVQETSNLRKELDQIRKENKTLTNYLQKEQQ
EAASLKEQNDQKEKEMSQLVKQMDQIKGEKDNLQSTLQQQGKETDNAKEMLTQMTKQMET
QQHEAAAQKGRSQILSLDGESKQNEKYNRAVIKINQMKEEREELNRKINDQSAEISTLEP
QLRGTQRELLKLKDNDQLLQVDLQSSEKEKERLSVELQKLQSLTHNMDDLKRENQELHKR
LSQQETLQNCPEDDLREKCRTLATQLQEVQLQLVSEREEANKSVRQSEFLQKDLLEVSEQ
SEKIIKSLEKEQRKSNKIELQLADAHAAIADIEGIVEDKEDMIMLLRHEKEGLHKENQSL
NNDIDGLRRVYDEHHSVPPADLPSRQPETPPRPASASPTDNWQPQQDTPEVHVYDTIENA
YSFPPGSAEDTEQEQMLVCRYCQESFPGITQHELEQHERSHRLCPYCTLICDNMEQAMYE
DHVYGHEL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccccgcagaggccgagggccgtaatccccacaccttctcccaggtggtgttc
accgacaccccgtactcatacccgccttcaatccccggaatcacctgctgctacaccctc
actgctgccttccagccgaaccccagggactgggtgggcatttttaaggtggggtggagc
tcaacaaaggattatcatacctttgtttgggtggagccatctctggatgtggtagggcaa
gagtctgccaacaggcaagcttattttaaagagtactacctgcctaaagatgaggtcgag
ttctaccagttctgctacgtgaacagtactggtaacgtgcgaggagccagcactcctttc
tgtttcagaagtccagaggagcaaagcatggagggcagcgtggatgatgacctcctggtt
attacaacacaggagcagttggaaaagggcgtacaggagacatctaatctgcggaaagag
ctggatcagataaggaaagaaaacaaaaccttaacaaattacctacagaaggaacagcaa
gaagctgccagcttaaaggagcagaatgatcagaaagagaaagaaatgagtcaactggtc
aaacaaatggatcaaatcaagggagaaaaggacaacttacagagcaccttacagcagcag
gggaaagaaacggacaacgcaaaggagatgttgacccaaatgacaaagcagatggagacg
cagcaacatgaagccgccgcgcagaaaggacgtagtcaaatcctgagtttggatggagaa
tcaaagcaaaatgagaaatacaatcgagctgtgataaagatcaaccaaatgaaagaggag
cgcgaggagctgaacaggaagatcaatgatcagagtgcggagatttccacgctagaacct
caactcagaggaactcaaagggaactgttaaagttgaaagacaacgaccagcttctccag
gttgaccttcagagcagtgagaaagagaaggagaggctctctgtggagctgcaaaagctg
caaagcctcacacacaacatggacgacctgaagagggagaaccaggagttacacaagagg
ctgtcgcagcaggagactctgcagaactgtcctgaggacgatctaagggagaagtgtcgg
actctggccacccagctacaggaagttcagctgcagctcgtgtccgagagagaggaagcc
aacaaaagtgtgagacaatctgagtttctacagaaagatctactggaagtcagtgaacag
tcggagaagattatcaaatcattggaaaaggaacaacgaaaaagtaacaaaatagagcta
cagctcgcagatgcacatgcagcaatcgcagatatagagggcattgtagaggacaaggaa
gatatgatcatgctgctaagacacgagaaagaagggctccacaaagaaaaccagagtctt
aataatgatatcgatgggctgcgcagagtttatgacgaacaccactcggtaccccctgct
gacttaccgtccaggcagcctgagacccccccacgccctgcctctgcatcacccaccgac
aactggcagccacagcaggacacacctgaagtgcatgtgtacgacaccatagaaaatgca
tactctttccctccaggaagtgctgaagacacagagcaagagcagatgctggtgtgtcgt
tactgccaggagagcttccccggcataacccaacacgaactggagcagcacgagcggagt
caccgattgtgtccctactgcacgttgatctgtgacaacatggagcaggcgatgtacgaa
gatcacgtctacggccacgagctgtga
DBGET
integrated database retrieval system
