Pseudochaenichthys georgianus (South Georgia icefish): 117464670
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Entry
117464670 CDS
T09629
Symbol
atrnl1b
Name
(RefSeq) attractin-like protein 1
KO
K24332
attractin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pgeo04091
]
117464670 (atrnl1b)
Lectins [BR:
pgeo04091
]
C-Type lectins
Others
117464670 (atrnl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_5
Kelch_4
Kelch_3
Kelch_6
EGF_LMN_ATRN
Kelch_2
CUB
PSI
EGF_TEN
NANM
EGF_Teneurin
EGF_2
TMEM100
PSI_integrin
EGF_laminin
RecR_ZnF
Motif
Other DBs
NCBI-GeneID:
117464670
NCBI-ProteinID:
XP_033963108
LinkDB
All DBs
Position
19:18655016..18729177
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AA seq
1376 aa
AA seq
DB search
MDPGGKCKTELLLFGPKLATHGDLRGINRYLVVCVLFYFVLYTHASPAKPCDKNCLSGKC
INGSCVCDRGWVGDQCQYCHGRFKLTEPSGYLTDGPINYKYKTKCTWLIEGYPNAVLRLR
FNHFATECSWDHMYVYDGDSIFAPLVAVFSGLIIPEIRGNETVPEVETTSGYALLHFFSD
AAYNLTGFEIFYSINSCPNNCSSHGKCTPGNSATSRVYCECDKYWKGEACDIPYCRNNCG
SPDHGYCDLTGEKLCVCNDSWQGPDCALTVPSTESFWVLPSVKPFGTSLARASHKAVVQE
KVMWVVGGYTFNYSSFQMILNYNLESGIWSTVPVSGGPVPRYGHSLAAYQDDIYMFGGKL
EAGLMNATEELWVFNLPSRTWQRRTPAGGAQTQIYAVEGHSAHCVLLDEGEAIMLVIFGY
SPIYSYVSNVQEYNLRSNTWVVPKTQGASPQGGYGHSSTFDSASGSVYVHGGYKAFPANK
YGLVDDLYRYDANTRTWFILRESGSPRYLHSAVLLSGTLLFFGGNTHNDTSLSNGAKCFS
ADFLAYDIACDEWRVLPKPDLHRDVNRFGHSAVVSNGSMFVFGGFSGTLLNDVLVYRPPS
CQAFLAEEGCVKAGPGVRCIWSRGRCFPWEPSMANGSIIPAPFCPLKAVTVDERCYRFSD
CASCTANTNGCQWCDDKKCLSASSNCTANVRNFTECPVRNEQVCTKMANCKSCSVNLNCQ
WDQNQSECHALPAQQCSEGWSHVGEACLRINSSLESYDNAQHYCKNLNGNIASLTTSKQV
DFVLEELKKLQQEDKRLSPWVGLRKINVSYWGWEDMSPFTNSSLRWLPGEPSDSGFCAYL
EETQVSGLRANPCTATAHGLICEKATGNPNQSSRPACKKPCSLHTSCANCTNQAMECMWC
GNAQRCLDSTAYVVSFPYGQCLEWQTRDCLAQNCSGLRTCSQCLEQPECGWCGDPSSTGK
GLCTEGSYRGPLKRPAKQGQQVQPSDMVLDPGVCPKDKGFEWAFIHCPACQCNGHSNCVN
GSVCEQCRNLTTGPHCQTCMPGYHGDPTNGGKCQACKCNGHANVCQVLTGKCFCTTKGIK
GDQCQLCDSENRYLGNPLRGTCYYNLLIDYQFTFSLIQEDDNHYTAINFMASPEQANKNL
DMSINASNNFNLNITWSVGSTAGTISGEEVPIVSKTNIKEYRDSFSCEKYTFRSNPNITF
YVYVSNFSWPIKIQIAFSQHNSIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQTCWASRRR
EQLMRERQQMASRPFASVALSLDSRGEETELLHPVVEGAPKPVAMEPCSGGKAAVLTVLM
RLPSGLSDLPPPGQSGLIVASALIDISQQKPSDFKDKSHGLKNRKAHHPSHQGTCV
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggtgggaaatgtaagactgaactgttactctttggacccaaactagccacc
cacggcgacttgcggggtatcaacagatacttggtggtctgtgttttgttttactttgta
ctgtacactcacgcctccccggcgaaaccttgtgacaagaactgtctatctggaaaatgt
atcaacggatcctgcgtctgtgaccgaggatgggttggagaccagtgtcagtactgccat
ggcaggttcaagttgacggagccctcaggatatctcacagatggtccaatcaactacaag
tataaaacaaagtgcacatggctcatcgagggctatccaaatgcggttcttcggttaaga
tttaaccactttgctacagaatgtagttgggaccatatgtacgtctacgatggcgactcg
atatttgctccgctggttgctgttttcagtggtctcatcataccggagatacgaggaaat
gagacggttcctgaggttgagactacttcgggctacgcactacttcacttttttagcgat
gctgcatataaccttacggggtttgaaatattttattcgatcaactcttgtcccaataac
tgctccagtcatgggaagtgcacgcccggtaactcggccaccagcagagtgtactgtgag
tgtgacaagtactggaaaggagaggcctgtgacatcccatactgcaggaacaactgcggc
agccccgaccacggctactgcgacctcaccggggagaagctgtgcgtctgtaacgacagc
tggcaaggcccagactgcgctctcactgttccttcaaccgagtccttctgggttcttccc
agcgtcaaaccctttggcacatcactcgccagagcttcccataaggctgtggtgcaggaa
aaggtcatgtgggtcgtgggcggatacacgttcaactacagctccttccagatgattctc
aactacaacctggagagtggcatctggagcaccgttcccgtcagcggtggccccgtgcca
agatacggccactctctcgctgcctaccaggatgatatctacatgttcggggggaagctg
gaggcgggtttgatgaacgcgacggaggagctgtgggtgttcaacttacccagccggacg
tggcagcggagaactcctgcggggggtgcacagactcagatttacgccgtggaggggcac
tcggcccactgcgtgctgctagacgagggcgaggccatcatgctggtcatctttggctac
tcccccatctacagctacgtcagcaacgtccaggagtacaacctgagatccaacacgtgg
gtagtacccaagactcaaggagcctctccccagggaggttacggccacagcagcacgttc
gacagtgccagcggcagtgtgtatgttcacggaggctacaaggcatttcctgccaacaaa
tacggccttgttgacgacctctaccgctacgacgctaacacgcggacatggttcatcctg
agagagagcggctctccacggtacctgcactcggctgtgctcctcagcggcaccctgctc
ttcttcggtggcaacacacataacgacacatcgctcagcaacggggccaagtgtttctct
gcggacttcctagcctacgacattgcttgtgatgagtggagggtcctgcctaaaccagac
ctgcacagggatgtcaaccgctttggtcactctgctgtggttagcaatgggtccatgttc
gtgttcgggggcttctccggcacgctgctcaacgatgtgcttgtttaccgaccccccagc
tgccaggccttcttggcagaggaggggtgtgtcaaggctgggccaggggtgcgctgcatc
tggagcagaggtcgctgtttcccctgggaacccagcatggctaatggaagcattattcct
gccccattctgcccccttaaagctgtcacagtggacgagcgctgctaccggttctcagac
tgtgccagctgtactgccaacaccaacgggtgccagtggtgtgacgacaagaagtgcctc
tctgcctccagcaactgcaccgctaacgtgaggaacttcactgagtgtccggtgcgcaac
gagcaggtgtgcaccaagatggccaactgcaagagctgctcggtgaacctcaactgtcag
tgggaccagaatcagtcagagtgccacgctttgccagcccagcagtgcagtgaggggtgg
agccatgtgggggaggcctgtctgaggatcaactccagcctcgagagttacgacaacgcc
cagcactactgcaagaacctcaacggaaacatcgcttcgctcaccacctccaaacaagtg
gactttgtcctcgaggagctgaagaagctccaacaagaagacaagcggctttctccctgg
gtgggcctgaggaagatcaacgtgtcgtactggggctgggaggacatgtcccccttcact
aacagcagcctgcgatggctgcccggagagcccagtgattctgggttctgtgcctacctg
gaggagacccaggtgtccggcctgagagccaatccctgcacggccaccgcccacggcctc
atctgtgaaaaagctaccggtaaccccaaccagagcagccgtcctgcctgtaagaagccg
tgctcgctgcacaccagctgtgctaactgcaccaaccaggccatggagtgcatgtggtgc
ggaaatgcccagcgctgtttggactccaccgcctacgtcgtctctttcccctacggacag
tgtctggagtggcagactcgagactgtttggcccagaactgctccggcctgcgaacatgt
tcccaatgtttggagcagcccgagtgcggatggtgcggagaccccagcagcacggggaag
ggtctctgcacggagggctcttaccgtgggccgctgaagagaccggcgaagcagggacag
caggtgcagccctcagacatggtcctggacccgggcgtctgccccaaagacaaaggcttc
gagtgggccttcatccactgccccgcgtgccagtgcaatggccacagcaattgtgtgaac
ggcagtgtgtgtgaacagtgccgtaacctcaccaccggtcctcactgccagacctgcatg
cctggttaccatggagacccgaccaatggcggcaaatgccaggcctgtaagtgtaatggt
catgcaaacgtgtgccaggtgttaactggcaagtgcttctgcaccaccaagggcatcaaa
ggagaccagtgccagctatgtgactcagaaaaccgttaccttggcaatccactcagagga
acctgttactacaacctcctgatagactaccagttcaccttcagtctcatccaggaagat
gataatcactacaccgccatcaacttcatggcctcacctgagcaggccaacaagaacttg
gacatgtccattaacgcatccaacaactttaacctgaacatcacctggtcggtgggatcc
acagctggaaccatctctggagaggaagtgcccatcgtgtccaaaactaacatcaaggaa
tacagagacagtttctcctgtgagaagtacacctttagaagcaaccccaacatcaccttt
tatgtctacgtcagtaacttctcatggcccatcaagatccagattgccttctcgcaacac
aacagcatcatggaccttgtccagttctttgttacatttttcagttgcttcctgtctctc
ctcctggtggctgcagtggtttggaagatcaaacagacctgctgggcttcacgacggaga
gaacagctgatgagagagcgtcagcagatggccagtcgtccgtttgcctcagtcgcgctc
tcactggattccaggggagaagaaacggaactgttgcatcctgtggttgaaggtgcgcct
aaacccgttgccatggagccgtgttcaggaggaaaagctgctgtgttgaccgtcctcatg
cgtcttccctctgggctctcagacttacctcctccaggacagtcaggactcatcgttgcc
agtgcgttgatagacatttcacagcagaaaccatcagattttaaggacaagtcccatggt
ttaaagaacagaaaagcccatcatccatcgcaccaaggcacctgtgtctga
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integrated database retrieval system
