Pseudochaenichthys georgianus (South Georgia icefish): 117464717
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Entry
117464717 CDS
T09629
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117464717 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117464717 (lrrc4bb)
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
NGL family
117464717 (lrrc4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
Ig_6
DUF7617
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
117464717
NCBI-ProteinID:
XP_033963224
LinkDB
All DBs
Position
19:complement(21288468..21310369)
Genome browser
AA seq
746 aa
AA seq
DB search
MRVVMVTSPCSPSPLLWLVQILLWFHNHGPQLTEAGPACPNPCTCSNQASRVICTRKSLE
QVPESISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGIKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNAYSYFTTVTVETVDTVRDREENSARQDVNMTFIEFPNP
TGRRGVLEGRPGITIPPSLSSLSSLSPRANKGPDNTVTVSIMDVTNIPGLDDVMKTTKII
IGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTM
NSGSGEGTLRIHHHPEIVNLPNIGRSDTLNHYYKTHHFNNNVMGLSIGSDGMGQGMMINS
KNQQMHDIPISCTSVPISTANMLSSSGNGNNMNPCSMSPPLPMSLPMPTMGLHGSIKGFM
GQHQNPQMEPLLFKGNSKENVQETQI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgttccccttcccccctcctctggttggtccag
attctgttgtggtttcacaaccatggaccccagctgacagaggcaggacccgcctgcccc
aacccttgtacgtgctccaatcaggcgagccgtgtcatctgtaccaggaagagtttagag
caagtcccggaaagtatttcagagaacacaagatacctcaatctacaagagaacactatt
caggtgatcaagtctgacacgtttaagcacctgcggcatctggaaatcctccagctctcg
aagaaccacatccggcagattgaggtgggagctttcaatggccttcccaacctcaacacg
ctggagctttttgacaaccgtctcacagtggtaccgtcacaagcctttgagtacctcagc
aagctaagggaattatggctacggaacaaccccatcgagacactgccggcctttgccttt
caccgtgttccctctttacgccgtctcgatctaggggaactcaggaaactggatttcatc
tcggaggcggccttcgaaggtctggtcaacttgcgcttcttgaatcttggcatgtgcggc
ttgaaggatatccctaacctcaccccactagtgcgactggaggagttggagctgtcaggg
aaccagctggggatagtcaggcctggatctttccagggcctggtgtcacttcgcaagctg
tggcttatgcactccagagtgtcagtcattgaacgcaatgcctttgatgacctcaaaaac
ttggaggagctcaacctctcccacaattccctgcattccctgccccatgacctcttcacc
cctttgcaccagttggagagggtacatctcaaccacaacccttgggtgtgcaactgcgat
gttctgtggctcagctggtggctgaaagagactgttcccagcaacaccacctgttgtgct
cgatgccatgcacccccaggtataaaaggcaaatacattggggaactagaccagagccac
ttcacctgctatgccccagtgattgtcgagccacccactgatcttaatgtcacagagggc
atggctgctgagctgaaatgtcgtacaggaacctcgatgacctctgtgaattggttcact
ccaaatggcaccctgatgacccacggatcgtaccgagtgaggatctcagtgcttcatgac
ggaacactgaacttcaccaacgtgaccgtgcaagacacggggcagtacacttgcatggtg
accaactccgccggaaacaccactgcaaccgctgtgctcaatgtgtctgcttcagacccc
agcaacgcctacagctatttcaccactgtcaccgtggaaacagtagatacagtgagagat
cgagaggagaactcggcaagacaggatgttaatatgaccttcatagaatttcctaatcct
acgggacgaagaggggtgttagagggccgaccaggaatcactataccgccttctctctcc
tctctttcctcactgtccccacgagccaacaaaggtcctgataatactgtgactgtgtca
ataatggatgtaactaatattccaggcttggatgatgtaatgaaaacaactaagatcatc
attggttgttttgtcgcaattacctttatggcagctgtgatgttggtggtcttctacaaa
ctccggaagcagcaccagctacacaagcaccatggccccgcaagagccatagagattgtc
aatgtagaagatgagatcggagctggggccgggagcggcatctcagggggttcaacgatg
aattctggcagcggagaaggaaccctaaggatacaccatcatccagaaatagtcaacctc
cccaacattggccgtagtgatactctcaaccattactacaagacccatcatttcaacaac
aacgtgatgggtctcagcattggctccgacgggatgggacaaggaatgatgatcaatagc
aagaaccagcaaatgcacgatatccccatctcctgtacctcagtcccaatctctaccgct
aatatgctcagctcatcaggaaatggcaacaacatgaacccttgttctatgtctccaccg
ctgccgatgtctctccccatgcctaccatgggcttacatggatcgatcaagggtttcatg
ggccaacaccagaatccccaaatggagccacttctcttcaaggggaactcaaaggaaaat
gtccaagagactcagatctaa
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