Pseudochaenichthys georgianus (South Georgia icefish): 117464773
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Entry
117464773 CDS
T09629
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04136
Autophagy - other
pgeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117464773
04136 Autophagy - other
117464773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117464773
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117464773
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117464773
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117464773
BRITE hierarchy
Motif
Pfam:
PROPPIN
WD40
ANAPC4_WD40
CPSF_A
BCAS3_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
117464773
NCBI-ProteinID:
XP_033963326
EnsemblRapid:
ENSPGEG00000020231
LinkDB
All DBs
Position
19:23536183..23546105
Genome browser
AA seq
454 aa
AA seq
DB search
MEPQESQDAPDGLEEQRAFICASFNQDTTSLSVGTKTGYRLFSVTAVDKLDCIHEGGLPL
VPLPVECPDVYIVERLFSSSLVVVVSLSMPRRMNVYHFKKGTEICNYSYSNDILSVRLNR
QRLVVCLEESVYIHNIKDMKLLKTLLNTPTNLTGLCALSVNHSNSYLAYPGSATIGEITV
YDANNLSTLTLIQAHDSPLAALAFNSSGSKLASASEKGTVIRVFSVPEGQRLFEFRRGMK
RYVSISSLSFSADAQFLCASSNTETVHIFKLEQHSPSQDEESPTWSTYMGKMFSAASTYL
PSQVSDMMHQDRAFATVRLNMFGLKNICALATIQKLPRLLVASSDGCLYIYNVDPQDGGE
CVLVQKHRLFESGEEQVEEKEEEDPEDGCPPPTSQSYAATVALPSTPPSSTTLMGYSEEG
GAQTGDVIPEHEFAESPVCLDDENEFPPVGNQSN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagccccaggagtcccaggacgctccggacggcttggaggagcagcgagccttcatc
tgtgcctccttcaaccaggacaccacttctctgtcagtgggcacaaagaccggctaccgg
ctgttctccgtcaccgctgtggacaaactggactgcatccatgaaggaggtctccctctc
gtccctctcccagtagagtgtccagacgtgtacatcgtggagcggctgttctccagcagc
ctggtggtggtggtcagtctgtccatgccccgccggatgaacgtctaccacttcaagaag
ggcacagagatctgtaactacagctactccaacgacatcctctccgtcaggctcaacaga
cagaggctggtggtgtgcctggaggagtcggtttacatccacaatatcaaagacatgaag
ctactcaagaccctgctgaacacccccaccaacctcacaggtctctgcgctctctctgtt
aaccacagtaactcctacctggcgtaccccggcagcgccaccatcggagagatcaccgtg
tacgatgccaacaacctgagcactttgaccctgatccaagcccacgacagtcccctggcg
gccctcgccttcaattcctccggcagcaaactggccagcgcttcagaaaagggcaccgtt
atcagagtcttcagcgttcctgagggacagagactgtttgaatttcgccgagggatgaaa
agatatgttagcatcagctcactatccttcagcgcagacgcccagttcctgtgcgcctcc
agtaacactgagaccgtccatatatttaaactggagcagcacagccccagtcaagatgag
gagtcccccacatggtcaacctacatgggtaaaatgttctcggcagccagcacctacctg
ccctcccaggtgtccgacatgatgcatcaggaccgagccttcgccacggtgcgcctcaac
atgttcggcctgaagaacatctgcgccctggctacgattcagaagctcccccgcctgctg
gtggcgtcctcagacgggtgtctctacatctataatgtggatccacaggatggaggagag
tgtgttctggtccaaaaacacaggctgtttgagtccggtgaggagcaggtagaggagaag
gaagaggaggatccagaggacggttgtccaccaccaaccagccaatcatacgctgccact
gtggctctcccttcaaccccgccctcctccaccactctcatgggttactctgaggaaggt
ggagcccagacaggtgacgttatcccggagcacgagttcgccgagagccccgtctgcttg
gacgacgagaacgagttccctccagtcggaaaccagagtaactga
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