Pseudochaenichthys georgianus (South Georgia icefish): 117464832
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Entry
117464832 CDS
T09629
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117464832 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117464832 (vti1a)
Membrane trafficking [BR:
pgeo04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
117464832 (vti1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Mer2
BPS1
GTP-bdg_N
Laminin_II
Sec8_N
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
117464832
NCBI-ProteinID:
XP_033963431
LinkDB
All DBs
Position
19:17386634..17499112
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AA seq
224 aa
AA seq
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MSSDFEAYELDFGTITAEVTNKIGRIPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRPMYNSRLKSYKGEIEKLEKDFKRSRIAYSDEVRNDLLGDDAGSSENQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEILSNLHSDREKIQKARERLRETDAN
LGKSSRILTGMLRRIIQNRVLVFMLGAIILLTIILAIYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgactttgaagcatacgagctggactttgggaccattacagccgaagtaacc
aacaaaattggccgaattcccaaactaagtggagaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagttgctggagcagatggacctggaggtgcgg
gagatccccatccagagccggccaatgtacaacagcagactgaagagctacaaaggggag
atagagaagctggagaaagactttaaaaggtcacgtatcgcctacagtgatgaggtgcgc
aacgatctcctgggggatgacgccggctcctcggagaaccagttgataaagttgcgtgaa
gagcgagcgcatctgttggacaacacagagaagctggaaaggtcatcacggagactggag
gccggctaccagatagcagtagaaactgaacaagtgggccaggagattctcagcaacctg
cacagtgaccgtgagaagatccaaaaagccagagagaggctgagagaaacagacgccaac
ctgggcaagagttctcgcatcctcaccggcatgctgagaaggatcatccagaaccgtgtc
ctggtcttcatgctcggagccatcatccttctcaccatcatcctggccatctatttcaat
ctgcgaggccactga
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