Pseudochaenichthys georgianus (South Georgia icefish): 117464841
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Entry
117464841 CDS
T09629
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117464841 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117464841 (smarcd2)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117464841 (smarcd2)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117464841 (smarcd2)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117464841 (smarcd2)
PBAF complex
117464841 (smarcd2)
GBAF(ncBAF) complex
117464841 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Motif
Other DBs
NCBI-GeneID:
117464841
NCBI-ProteinID:
XP_033963452
LinkDB
All DBs
Position
19:complement(19881490..19890779)
Genome browser
AA seq
514 aa
AA seq
DB search
MASRGGGGGGFTPMGLSPMNVGHAAGMRMPGMPQPPGGYSRGMNNAPQYPQRPGMPSNRV
GGPMGSMGGQLPGPSYGSGNMSMRQGMGPPGMDASRKRFLHMHQQQQQQQQQQQQQQQQQ
EALGGLRRGPKRRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIK
KPIMQKRKLRIYISNTYTPSKPEGEEAEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLV
IELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRL
ARLLGVHTQTRASIMQALWLYIKNNKLQDCHEKEFINCNRYFRQIFGCPRMKFSEIPMKL
AGLLQHPDPIIVNHMISVDPNDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALE
IKIHETIEYINQLKTERDFMLSFSNKPQDFIQDWLKSQCRDLKLMTDVTGNPEEERRTEF
YEGPWVPEAVGRYVYSKVQQRRQDLEQVLGIRLA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagaggaggaggaggaggagggttcaccccgatgggtctgagccccatgaat
gtggggcatgctgcgggcatgaggatgccaggtatgccccaacctccggggggatactcc
cggggcatgaacaacgctccccagtacccacagcgcccagggatgccatctaaccgagtt
gggggcccaatgggatcaatggggggtcagctgcctggcccttcttacggcagtgggaac
atgtccatgaggcaaggcatggggcctccaggcatggacgcttccagaaaacgctttctt
catatgcatcaacagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaa
gaggcgctgggaggcctgagacgagggccaaagagacgaaagatggccgacaaggttctc
ccacagaggatcagagacctggtcccagagtcccaggcctacatggacctcttggccttt
gagaggaaactggaccagaccatcgctcgaaagcgtatggagatccaggaagccatcaag
aagcccatcatgcaaaaacgcaagctcaggatctacatttccaacacgtacacccccagc
aagccggagggcgaggaggcagagaaggtgtcctcctgggaactgagagtggagggaaaa
cttctggaggaacctggcaagcagaagaggaagttctcatctttcttcaaaagcctggtg
attgagcttgataaggagctctatggacccgacaaccacctagtagagtggcacagaatg
cccaccactcaggagacggatggtttccaggtcaaaaggcccggtgatgtgaatgtgaaa
tgcaccctgctgctcatgctcgaccaccagccccctcagtacaaactggacccccggttg
gctcgtctgctcggtgttcacacacagacgcgagccagcatcatgcaggccctttggctc
tacatcaagaacaacaagctgcaggactgtcatgagaaggagttcatcaactgcaaccgc
tacttcagacaaatcttcggctgtcctcgcatgaagttctctgagattcccatgaaactg
gcaggcctgctgcagcaccctgaccccatcatcgtcaatcacatgattagtgtggacccc
aacgatcagaagaagacggcgtgctatgacattgatgtggaggtggatgaccctctgaag
ggccaaatgaacagtttcctgtcctctacaacaaaccaacaggaaattgctgcgctggaa
attaagattcacgagacgattgagtacatcaaccagctgaagactgagagagacttcatg
ctgagcttcagcaataaacctcaggacttcatccaagactggctcaagtctcagtgcaga
gatctgaagttgatgactgatgtgacaggaaacccagaggaggagaggaggactgagttc
tacgaagggccctgggtaccagaggctgtgggcagatacgtctactccaaggtgcagcag
agaagacaagacttggagcaggtgttgggaatccgtctcgcctaa
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