Pseudochaenichthys georgianus (South Georgia icefish): 117464922
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Entry
117464922 CDS
T09629
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117464922 (rnf40)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117464922 (rnf40)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
117464922 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
SpoIIE
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
117464922
NCBI-ProteinID:
XP_033963579
LinkDB
All DBs
Position
19:22397796..22415525
Genome browser
AA seq
998 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPVPPEKKTKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLDENVQVLRKRIEPGTPV
SSTPAPPAPPLPGPTPMEEDGVSLASQTSAVPPPPLPASPNGGELAEKQDAHQEERLEGQ
KQPPPPTGSEEMNLKEPPHDSSTDASSPPPPLSDNAKGFLVTLEHSSEEELSLHLQDRMQ
FSKEAIACLVCVFDRLHSRIDSMCKQVQAAACDDDSQSDIINENHTLLDENTRLRDLTTL
LQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRTREQKLNKHLAEAMEQ
LKSGYSTSSSGGISGGQITLNIQKFESLNAELEHNAELANSRMAELEKLQAELQEAVRES
EKLKMDLRNIPEDVVKETVEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQI
EHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLI
SSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGTLILDETTNDSIEVKKEDDED
HEEEEERRKELERQRAREREREREADRERDRERERQRSDELKRKDSDTLKMLRVELKKAQ
ESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESKKLAD
EDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLREKD
DANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGVLQSTLA
ALEKELTVRTQGLELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARERESS
NLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKETVLTKC
FHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgccgggggaggaaaacgtccctcaggaggggacagcccccctgtcccacct
gagaagaagaccaaaaaagaggagaagacgactaccactctgatagagcccatacgcata
gcaggagtctcctctacggaggaaatggacatgaaggtcctccagttcaagaataagaag
ctatgcgagcgcttggagcagagacagacgatggaggatgagttacgagagaaaattgag
aagctggagaagagacaagccaccgatgacaccaccctgctgattgtcaaccgctactgg
tcccagttggacgaaaatgtgcaagttctgcggaaacgtattgagcccggcactccggtg
tcatcgacccctgccccacctgcaccccccctgcctggaccaacacctatggaggaagat
ggtgtcagtctggcctcacaaacttccgccgtgcctccacctcctctaccagcgagccca
aacgggggggagctggcagagaagcaggacgcgcatcaggaagagcgcctagaagggcag
aagcagcccccgcctcctactgggtcagaagagatgaacctcaaggagccgccacacgac
tcatcaacagatgcatcgtcgccccctcctcctctaagtgacaatgctaagggcttcctg
gttactttggagcacagcagcgaggaggagctcagcctgcacctccaagaccgcatgcag
ttcagcaaggaagccatcgcctgcctggtctgcgtcttcgaccggctacacagccgcatc
gacagcatgtgcaagcaagtccaggctgcagcatgtgatgacgatagccagtctgacata
atcaatgaaaaccacactctgctggacgaaaacactcgactgcgagacctgaccactctg
ctgcagggccgacaccacaagatgtccatggagtacaacgagttagtggacaaggtgacc
agctctgagaccaaggtatctgagatggagacgacagtcgaggacctgcagtgggacatc
gagaaactgcgcaccagggaacaaaagctcaacaaacatctggctgaagccatggagcag
ctgaagtccggatacagcaccagcagctcaggaggaatctctggaggccagattactctg
aacattcagaagtttgagagtctcaatgcggagttggagcacaacgcggagttggcgaat
agccgcatggcagagttggagaaactccaggcggagctgcaggaggcagtgagggagagt
gagaagctcaagatggatttgcggaatattccagaagacgttgtgaaggagactgtggag
tacaaatgtctgcagtcgcagttctccctgctttacaacgagtccctgggggtgaaaacc
cagctggatgaagcacgcgccctcctgctcactgccaagaacgcccacctccgacagatc
gagcacatggagagtgatgagctgtcgctccagaagaagctgcggaccgaggttatccag
ctggaggataccctggcccaggtgcgcaaagaatacgagatgttgcggatcgagtttgag
cagaacctggcagccaatgagcaagcagggccaatcaacagagagatgaggcacttgatc
agcagccttcagaaccacaacctgcagctgaagggggacgtgcagcgctacaagaggaag
ctgcgggaaacccagatggagatcaataagttgcgttgtcaaagtggcgacacggggact
ctgatcctcgacgagacgacgaatgacagcatcgaagtgaagaaagaggatgatgaggac
catgaggaggaggaggagaggaggaaggagttggagaggcagcgggcccgggaaagagag
agggagagggaggccgaccgagagagggatcgggagagagagaggcagcgcagcgacgag
ctgaagaggaaggactcggacactctgaagatgctcagagtagaactcaagaaagcccag
gagtcccagaaagagatgaagctcttgttggacatgtacaaatcagctccaaaagagcag
agggacaaagttcagctcatggccgccgaacgtaaatctaaagctgaggtggatgagctg
aggatgcgagtgcgagagctggaggagagggagaggaaggagagcaagaagctggcggat
gaagatgccctcaggaagatccgagtggcagaggagaccatcgagcatctgcagaagaaa
ctcgcggccacgaaacaggaggaggaagccctgctgagtgagatggatgttacaggccag
gccttcgaggacatgcaggagcagaacagccgcttgttgcagcagcttcgagagaaagac
gacgccaacttcaagctgatgagcgagcgaatcaaatccaaccagatttacaagctgctg
aaagaggagaaggaggagctggctgaccaagttctcacattcaaaacccaggtggacgca
cagctgctggtggtgcagaaactggaggagaaagagggcgtcctgcagagcacactcgcc
gctctggagaaggagctgactgtccggacacaaggactagaactcaacaagaggaaggcg
gtggaggctgcccagctggcggaggacctgaaggtgcagctggagcacacgcaggccaag
ctgaaggagatccaggtctctgtggcggagaaccgcaccgcccgggagagggagagctcc
aacctgaagagagcgcaggaggatctgtccaggctgaggcggaagctggagaagcagaag
aaggtggaggtgtactctgacgctgatgagatcctgcaggaggagatcaaccagtacaag
gccaagctgcgctgcccctgctgcaacacacgagacaaggagacggtgctcaccaagtgt
ttccacgtgttctgctacgagtgtctgaagatgcgttatgacacccggcagaggaagtgc
cccaagtgcaactgcgccttcggggccaacgactttcaccgcatctacatcacctaa
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