Pseudochaenichthys georgianus (South Georgia icefish): 117464974
Help
Entry
117464974 CDS
T09629
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117464974
Pattern recognition receptors [BR:
pgeo04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117464974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
Cmr7b-like
LBP_C
Motif
Other DBs
NCBI-GeneID:
117464974
NCBI-ProteinID:
XP_033963680
LinkDB
All DBs
Position
19:complement(21838319..21844231)
Genome browser
AA seq
909 aa
AA seq
DB search
MVRTALFLLLLNTSGCCGFGFKSCFMFYPGTGNMWCSNQNIANLTDVLSKIPDNTTKLNM
SKNKINVIPPGSWSHLSGLKYLDMSQNKLAYLKGGAFRGLGVLKLLNLTRNNISHINSSS
FDGLSMLQTLLLNRNKLGTISPVIFNSLPAIQHVDLSNNILQSLSCGDSSGSSTLQRLDL
FSNSIRMINLSCFPALQHITLSFNPKLELQSDVFASNPGLKSLLCEGVKAEVLMGLSAET
KRNLSWVSFSLSLEESPLTICGLLKGMEQLDRVEVDLKRSRLPETNSSLMDCDTPSMVVI
NNANLEHVTQLSLGRGNTSKLYLNNCGLMQISRTTFDGYPGLRTLQLNRNAPDIQRDTFL
GLNHLTSLGVDSCRVRDVDPNWFVPLKKLTRLSLIKNDISWLRKNVFSKLIKLEELYLQF
NMLKYINKPFSKLRRLIKLNLSSNIIIFIKSHTFEDLINLRSLSLNGNRIKMLSTDILSG
LTNLRKMVLYNNRLRFKHNEAPFINLTSLEFLDMRYQGPARECIGVIGPNFFKGQSRLLA
FKIGQSRMLEFHPDAFVPLINLQNLFIVGVAMKKTNLSAAFSPLKSLKQLTLRAALDVLP
ANLLPPDNSLEYIKVWSNHLHTVDKNMLDALPRLLVLDISDNPISCNCDNAWFKNWAIHN
TQTRVSFLYDLRCDKERKSPFLWQFDEKACSFEYVSFTLFIACSVVDILFVCVCLAWHTQ
GPTVRYLLLVLRAKLRGRRSAKFQYDAFISYSSKDEGWVMKQLVPNLERPAAGAPPLRLC
LHHRDFRPGAAVLENIEAAIYGSRHTICVVTRNFLQSEWCSVEFQLASLRLFYDGSDVLL
LVFLEEIPERCLSPYTRLCKIVRKKTYLLWPEEPQEQDTFWVRLVDALKDKEEEEGEGGG
EHDMARLIG
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaactgccctcttccttctgctgctcaacacctcgggctgctgtggttttggc
tttaaaagctgcttcatgttctaccccgggactggcaacatgtggtgcagcaaccagaac
atagctaacctcactgacgtcctgagcaagatcccagataacacaaccaaactaaacatg
tccaagaacaagatcaatgtcatcccacctggatcatggagtcatctgtctgggcttaaa
tacctggacatgagccagaacaagctggcctatctgaaaggaggagccttcagaggcctg
ggtgtcctgaaattactcaaccttaccagaaacaacatctcacacatcaactctagtagc
tttgatgggctaagtatgctacaaaccctgcttctgaatcgaaacaaacttggcacaatc
tctccggttatctttaactccctaccagcgattcaacatgtcgatctgtccaataacatt
ctccagagtctcagctgtggagactctagtggatcttctactcttcagcgtcttgatctt
ttctcaaacagcatccggatgataaatctgagctgttttcctgccctgcagcacatcact
ctgtccttcaacccaaagctggagctacagtccgacgtgtttgcctccaaccccgggctg
aaaagtctgctttgcgagggagtaaaagccgaagtgctgatgggactctcggcagagaca
aaaaggaatctctcttgggtctcgttttctctgtctttggaagaatctccattgaccata
tgcgggctgctgaaaggaatggaacagcttgatagagttgaggtggacttgaagagatcc
aggttaccagagacaaactccagcctcatggactgtgacactccaagtatggtggtaatt
aataatgcaaacctcgaacatgttacccagttatcattgggcaggggtaacacgagcaaa
ctttacctaaacaactgtggtttgatgcagatatctcgtactacatttgatggttaccca
ggactgagaacactgcagctaaatagaaacgcacccgacattcagcgagatacattccta
ggactgaaccaccttacgagtttaggcgtggacagctgcagagttcgtgacgttgacccc
aactggtttgtccctctgaagaagctgactcgcctgtctctcattaaaaatgatatcagt
tggttgagaaagaatgtattcagcaaacttattaaacttgaggagctctacctgcagttc
aacatgctgaaatacatcaataagcccttcagtaagttgcggaggctaattaagctcaac
ctcagctcgaacatcatcattttcatcaaaagccacacctttgaagaccttatcaacctc
agatctttgagcttaaatgggaaccgcataaagatgctatcaacagatattctgtctggc
ctgaccaatttgaggaaaatggttttgtacaacaaccgcctccgttttaagcacaatgaa
gcccctttcatcaaccttacttcccttgagtttctggacatgcggtaccaggggcccgca
cgtgaatgcattggtgtcattggaccaaatttcttcaaaggtcaaagccgacttctcgca
ttcaagattggacaaagcagaatgttagaattccacccggacgcctttgttcctctgatc
aatttacaaaacttgttcatagtcggagtggctatgaaaaagaccaacctgagcgcagca
ttctcccctctgaaaagtctgaaacaactgaccctcagagcagccctcgatgttctcccc
gctaacctgctgcctccagataactcactggagtatatcaaagtttggtcaaaccacctt
cacactgtggacaaaaacatgctggatgctctgccaagattgcttgtattggacatttca
gacaacccgatcagctgtaactgtgataatgcctggttcaagaactgggccatccacaac
actcaaacaagggtgtccttcctgtacgaccttcggtgtgacaaggaaaggaaatctccc
ttcctttggcagtttgacgaaaaggcttgctcctttgaatacgtttccttcaccctcttc
atcgcctgctctgttgtggacattttgtttgtatgcgtgtgtctggcctggcacacacag
ggccccactgtgcgctacctgctgctcgtcctcagggccaaactacgtggacgtagaagt
gccaaattccagtatgatgcattcatctcctacagctctaaggatgagggctgggtgatg
aagcagctggttcccaacctggagaggcctgctgcaggtgcaccccccctccggctgtgc
ctccaccacagagacttccgacccggcgctgctgtcctggagaacatcgaggccgccatt
tacggttctcgccacaccatctgtgtggtgacgcgtaatttcctgcaaagcgagtggtgc
tccgtggagtttcagctggccagtctgaggcttttctacgatggcagtgatgtcctgctg
ctggtgtttctggaggagatacctgaacgctgcttgtctccctacacacgtttatgcaag
attgttcgcaagaagacctacctgctgtggccggaggaaccacaggagcaggacaccttc
tgggtcagactggtcgatgctttgaaggacaaagaggaggaggagggagaaggaggtgga
gaacatgatatggcacgtctaattggctag
DBGET
integrated database retrieval system
