Pseudochaenichthys georgianus (South Georgia icefish): 117465028
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Entry
117465028 CDS
T09629
Symbol
ush1gb
Name
(RefSeq) pre-mRNA splicing regulator USH1G
KO
K21878
Usher syndrome type-1G protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117465028 (ush1gb)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117465028 (ush1gb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_4
Ank_2
Ank
Ank_3
Ank_5
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
117465028
NCBI-ProteinID:
XP_033963756
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Position
19:complement(7050781..7081081)
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AA seq
474 aa
AA seq
DB search
MNDRYHRAARDGYLDVLKEATRKELNAPDEDGMTPTLWAAYHGNLEALRLIVGRGGDPDK
CDIWGNTPLHLAAANGHHNCLSFLVAFGANVWCLDNDYHTPLDMAATKGHMDCVRYLDSI
TAKQITLNPKLVTKLKDRAFRAAEHRIKDCAKLQRKHREHMERKFMKESAALDNLDAISF
SSYNSGSTLSRKFNTVTSNMPYSQATLQSTAKGKAKIQRKLEKKKQGDGTFKIYEDGRKS
VRSLSGLQLGNDVMFLKQGTYANPKERSHLNIRDMFARDHDDDGDTVSRAMSEPGLHETA
YSEISADSGRDSLFTRPGLGTMVFRRNYLTGAMFTRGEGSVVGSEPLGRAPNVRLRGPLP
QRSPSLDEDSIGSALSLQERNLQELPWEETDVGMDEDMELESSPLDTFLASQSLSEFMLI
FRREKIDLEALLLCSDHDITSIHIPLGPRKKLLEACKRRLDTIDEPEAIEDTEL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccggtaccaccgggcggcccgggacggctacctggacgtgctgaaggaggcc
acacggaaggagctgaacgccccggatgaggatgggatgacaccgaccctgtgggccgcg
taccacggcaacctggaggccctgcggctcatcgtggggagaggaggcgatccggacaag
tgtgacatctggggcaacaccccgctccacctggcagctgccaacggccaccacaactgc
ctgtccttcctggtggctttcggtgccaacgtgtggtgtctggacaatgactaccacaca
ccgctggacatggccgccaccaagggacacatggactgcgttcgctacctggactccatc
actgccaagcagataacactcaacccaaagctggtcaccaaactcaaagaccgggcgttt
cgcgcagcagagcaccgaatcaaagactgtgcaaagctccagaggaagcaccgtgaacac
atggagaggaagttcatgaaggagtcagcagctttagacaacctggatgctatcagcttt
tctagctacaacagcggcagcacactgagccgcaagttcaacactgtgacctccaacatg
ccatactcgcaggccacgctgcaatccacagccaagggcaaggccaagatacagaggaaa
ctagagaagaagaagcagggtgatggaaccttcaagatctacgaggacgggaggaaaagt
gtgcgctcgctgtctggtctgcagctcggcaatgatgtcatgttccttaaacagggcaca
tacgccaaccccaaggagcgatctcacctcaacatccgcgacatgttcgcccgtgaccat
gacgacgacggcgacacagtctctcgtgccatgagcgagccaggcctccacgagaccgcg
tattcggagatcagcgcagactccggacgtgactccctcttcacccgacctgggcttggc
accatggtgttcaggaggaactatttgactggagccatgtttacacggggtgaagggagt
gtagtgggaagtgaaccattgggccgggcacctaatgttcgactacgaggacctctgcct
caacgctcgcccagcttggatgaggacagtattggcagtgccttgagcctgcaagaaagg
aaccttcaggagttgccatgggaggagacagacgttgggatggatgaggacatggagcta
gagagcagtcctctggacactttcctggcctctcaaagcctcagtgagttcatgctgatc
ttcaggagagagaagatcgacctggaggctctgctgctttgttcagatcatgatattacc
agtattcacatccctctgggcccaaggaagaaacttctggaagcctgcaagagacgcctg
gataccatagacgaaccagaggccattgaagacactgagctctga
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