Pseudochaenichthys georgianus (South Georgia icefish): 117465049
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Entry
117465049 CDS
T09629
Symbol
sema6d
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
117465049
NCBI-ProteinID:
XP_033963799
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Position
3:complement(25862681..25882509)
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AA seq
1110 aa
AA seq
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MGQRAVLLLSELLLLLLTASRTILAVSFPEDNVPLDVVDAHFSRRYPVFRGRPSGNESQH
RLDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQADRDMCAVKGKHR
DECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEINGLARCPFDSKQTNV
ALFAEGKLYSATVADFQASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYF
FYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFD
VLQSITDIININGVPSVVGVFTTQMNSIPGSAVCAFSMDDIEKVFSGRFKEQKTTDSVWT
PIPEDKLPKPRPGCCAGHGPAASLKSSIEFPDDTLQFIKSHPLMDTAVPSLGDEPWFTKT
RVRYRLTALAVDNEAGPHKNYTVVFIGAESGVVLKVLAKTSSMSLNDSLLLEEIDVFNRA
KCLSNHEDDKRVLSLHVDKEAHSLYVAFSSCVIRIPLSRCERHTTCHKSCIASRDPYCGW
KPYGACERILPGFLTGYEQDVEFGNTTHLGDCHAFLGSTSAPDYKSFGDPTSDMEFSSTP
VTVHPSGPILPPVLIPTQSPSSGPDPELYGSGFVLQDDPATSHSLDSIPGGQEGVWDIQA
GETNQMVHMNILITCVFAAFLMGALLAGLFVFCYRDSFLRKPRHVHKDAESAPSCSDSNG
SFIKLNGLFDSPVKEYQTNIDSPKMYTNLMSNGKDLNSPNGDTKTMILRDGCQPPELAAL
PTPESTPVLQQKSLQPITNQWERAPGKASGPRKESNSSAKSPQFLLSAPAPPISNSNLPH
LALGHSQIPSAVVLPNATHDNSNHDSGDDTLPHSSERRLKNPDSKGCRKEQKKSVDARNT
LNDLLKHLNDSVANPKAILQEASGPRPRQHLTLEPMEELTELPPKVPSREASLYSPSSSL
PRNSPTKRVDVPLLSTPTTPTGSLSMGGTLERQRGGYQLHRSASHRQSLSTSPSGVTMGV
SVSRQHSMNRGGYMPPTPPSRLDSQGGLMGAGMHSPHQSSVPRQGSYSGYGSLPRTGLKR
TPSLKPDVPPKPNGFPPQTPQMRVVNKYSY
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagctgtgcttctgctcagtgagctgctgctgctgctactgacagcctca
cgcactatcctcgccgtcagcttccccgaggacaacgtaccccttgatgtcgttgacgca
cacttttcacggagataccctgtgttcagaggccggccctctggcaacgagtcacagcat
cgccttgactttcagctgatgaccaagattcaggacactctgttcatcgctggcagagat
caggtgtacctggtcagtctgagggaatcctacaggaatgagatcattccttacaggaag
ctaacatggcgatcaggacaagctgacagagacatgtgtgccgtgaagggaaaacacaga
gacgagtgccacaacttcatcaaagtgctggttcccagaaacgatgacttggtgttcatc
tgtggtaccaacggcttcaaccccatgtgcagatactacaggctggataacctcgagttt
gatggggaggaaatcaatggattggcacgatgcccatttgactccaagcaaactaacgtt
gcccttttcgctgaggggaaactgtattcagcaactgtagctgacttccaggccagtgat
gctgtcatctaccgcagtatgggtgatggatcggccctgaggaccatcaaatatgactcc
aaatggctgaaagaacctcatttcctgcacgcagcagagtatgggaattacgtgtacttt
ttctaccgagagattgcagtggagcacagcaacctgggaaaggttgtgtattctcgtgtg
gctcgaatctgcaagaatgatgtcggggggtcgcagcgggtgcttgagaagcactggaca
tcttttgtgaaggcgaggcttaattgctcggtgccaggggagtccttcttctacttcgat
gtgcttcagtccatcactgacatcatcaacataaatggagttccctcggtggtgggcgtg
ttcactacgcagatgaacagtatccctgggtcagcagtgtgtgccttctctatggacgac
atagagaaagtattctcgggccggttcaaagagcagaagactactgattctgtgtggact
ccaattccagaggataagcttcccaaaccccgacccgggtgctgtgcaggtcatggtcca
gctgcgtccttaaagagctccatcgagtttccggacgataccctgcagttcatcaagtcc
caccccctcatggacacagctgtgccttctcttggggatgagccttggttcaccaagacg
cgcgtcaggtacagactgacagcactggctgtggacaatgaagcaggacctcacaagaac
tacacagtggtgttcatcggggccgagtcaggggttgttctcaaggttttggccaagacc
tcgtcgatgtctttgaatgacagcctgcttctggaggagatagatgtcttcaacagggcc
aagtgcctgtctaaccatgaggacgacaagcgtgtcctctcgctgcacgtggacaaagaa
gcacacagtctgtatgtcgccttttcaagctgtgtcatccgaattcccctgagtcgctgt
gaaaggcatactacgtgccacaagtcttgcattgcatcaagggatccttactgtggctgg
aagccatatggagcctgtgagaggatactgcctggttttctgactggatatgagcaggat
gtcgaatttggaaacactacccacctgggagactgtcatgcgtttttgggcagtacatca
gcgccagattacaaatcatttggcgaccctacctctgacatggagttttcatcaacgcca
gtcactgtccaccccagtgggcccatactccccccagtactcatacccactcagagcccc
agctctgggcctgatccagagctctacggctcaggctttgtgctgcaggatgacccagcc
acctcccattctttagactctatcccagggggccaagagggtgtgtgggatatccaagca
ggtgagaccaaccagatggtccacatgaacatcctcatcacctgcgtgtttgctgccttt
ctcatgggtgctctccttgctggtctgtttgttttctgctaccgagactcattcctccgt
aagccaagacatgtccacaaggacgcagagtctgcaccatcctgctccgactctaatgga
agctttatcaagctcaatggcctctttgacagccctgtaaaggagtaccagactaacatt
gattctcccaagatgtacaccaatctgatgagcaacggcaaagacctgaattcacctaat
ggagacaccaagaccatgatcctgcgggacgggtgtcagccccccgagctggcagccctg
cctacaccggagtctacccctgtgcttcagcagaaaagcctgcagcccattacaaaccag
tgggagagggctcctggaaaggcaagtggaccgcgtaaggagtccaactcatcagccaag
agtcctcagttccttctttctgctcctgctcctcccatctccaactccaacctccctcac
ctcgcattgggacactcacagatccctagtgcggttgtcttgcccaatgccacacatgac
aactccaaccatgacagtggagatgatactttgccacattcatctgaaaggaggctgaaa
aacccagattctaaaggatgtaggaaggaacagaaaaagtcagtggatgccagaaatacc
ctaaatgaccttttaaaacacctaaacgactcagtggccaaccccaaggccattcttcaa
gaggcatcagggcctcgtccacggcaacatcttactctggagcccatggaggaactgact
gaattaccccccaaggtgcccagccgtgaggcttccctgtactctccctcctcctccctc
cctaggaacagccccaccaagagggttgatgtgcccctgctctccacaccaacaacacca
acgggcagcctgagcatgggtggcaccctggagaggcaaagaggggggtatcaactccac
cggagtgcctctcacaggcaatccttatccacctcaccgagtggggtaaccatgggggtg
tctgtgtctcgccaacacagtatgaacagagggggttacatgcccccaacacccccctcc
agacttgactctcaaggtggattgatgggggcaggaatgcactcaccccaccaatcgtct
gtaccccgacagggcagctacagtgggtatggttcactccctcgcacagggcttaaacgg
accccatcgctaaagccagatgtgccccctaaacccaatgggtttccaccacagactcca
cagatgcgagtggtcaacaagtacagttattaa
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